Rv0667 - c.2124G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
94 Sensitive
3 RR-TB
42 HR-TB
13 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
75 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 143 |
| 3 | |
| lineage1.1.1;lineage4 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| La3;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| La1.7;lineage4.9 | 5 |
| lineage4.1.2.1 | 6 |
| lineage2.2.1 | 13 |
| lineage4.8 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.9;lineage9 | 2 |
| La1;lineage4.9 | 2 |
| lineage4.3.3 | 1 |
| lineage3 | 3 |
| lineage4 | 6 |
| lineage1.1.2 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.3.4.1 | 2 |
| lineage2.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| La1.7 | 2 |
| M.canetti;lineage4.9 | 2 |
| lineage4.1.1.2 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.3 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.9;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage1.2.2.1;lineage4.4.1.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.5 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.8.1 | 1 |
| lineage6.1.1 | 2 |
| lineage4.1.1.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 231 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045892 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR137286 | Other | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR3675279 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR349299 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR751326 | Other | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR3675441 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR987722 | MDR-TB | None | ERR349264 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR5535933 | Other | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR11465351 | Sensitive | lineage4.1.2.1 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR867542 | HR-TB | lineage4.3 | None | ERR349298 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4816656 | Other | lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR29096150 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR176740 | Other | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR369162 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR3675270 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR1791747 | Other | La1.8.1 | None | ERR6358979 | Other | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR2660539 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR6046245 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR926163 | Other | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR363502 | Other | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR363447 | Other | lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR29097026 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None |
|---|
