Rv0006 - c.1572A>T
Drug resistance types
8 Sensitive
2 RR-TB
15 HR-TB
9 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.1.2.1 | 2 |
| lineage4.9 | 19 |
| lineage4.2;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.5 | 1 |
| lineage2.2 | 2 |
| lineage2.2.1 | 1 |
| lineage4.8 | 2 |
| La1;lineage4.9 | 1 |
| lineage6.1.1 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3.1.2.2 | 1 |
| La1.7;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage2.2.1.2 | 1 |
| La1.2.BCG | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage3 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.4.2 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1;lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 53 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR5341456 | Other | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR752229 | Other | lineage4.5 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR4799025 | Other | lineage4.8 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR29096410 | Other | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR5535933 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR29096150 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR29097026 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None |
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