Rv0006 - c.1572A>T
Drug resistance types
8 Sensitive
0 RR-TB
27 HR-TB
0 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| 20 | |
| lineage4.9 | 5 |
| La2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.4.2 | 1 |
| lineage4 | 6 |
| La1.3 | 5 |
| lineage6.1.1 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage3 | 1 |
| lineage3.1.2 | 1 |
| lineage4.8 | 1 |
| lineage2.2.1.2 | 2 |
| La1 | 1 |
| lineage4.5 | 1 |
| La1.7.1 | 1 |
| lineage2.2.1 | 1 |
| lineage2.2 | 2 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 55 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5535933 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341456 | Other | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341470 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR6046299 | HR-TB | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046492 | Other | None | ERR294266 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323053 | HR-TB | None | ERR323039 | HR-TB | None | DRR188519 | Other | lineage4.4.2 | None | ERR1063855 | Other | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3283055 | HR-TB | None | ERR4769408 | Other | La1.3 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | SRR1174897 | HR-TB | None | ERR4769555 | Other | La1.3 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4798262 | HR-TB | La1 | None | ERR736865 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | SRR10808805 | Sensitive | None | SRR1172310 | HR-TB | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR14782405 | HR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR176740 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | ERR4818252 | Other | lineage4.1.1.2 | None |
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