lineage | Count |
---|---|
lineage4.9 | 89 |
M.canetti;lineage1 | 1 |
lineage4.9;lineage9 | 1 |
lineage4.1.2.1 | 5 |
lineage4.3.2.1 | 1 |
lineage4.3.4.2.1 | 2 |
La1.7;lineage4.9 | 5 |
lineage3 | 2 |
lineage4.9;lineage7 | 1 |
lineage2.2.1.2 | 2 |
lineage4.3.3 | 1 |
lineage4 | 3 |
La3;lineage4.3.4 | 1 |
La1.7.1;La1.7.X-unk4;lineage7 | 1 |
La1.7.1 | 1 |
lineage4.3.4.1 | 2 |
lineage2.2 | 3 |
lineage4.1.1.1 | 1 |
lineage4.1;lineage4.9 | 1 |
La1.7.X-unk4;lineage4.9 | 1 |
lineage4.8.1 | 1 |
La1.7;lineage3.1;lineage4 | 1 |
lineage2.2.1 | 2 |
lineage3.1.2.1;lineage4 | 1 |
La3;lineage4.9 | 1 |
M.canetti;lineage4.9;lineage9 | 1 |
lineage6.1.3 | 1 |
lineage4.8 | 1 |
lineage2.1;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 134 |
ID | Drug resistance | Lineage | Country iso2 | ERR363426 | Sensitive | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR29096178 | Sensitive | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR6046802 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR26331611 | Sensitive | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR11465333 | Sensitive | lineage4.3.4.2.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR3675292 | Sensitive | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR6045371 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR7240538 | Other | La1.7.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR4769452 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR10808730 | Other | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR11465604 | HR-TB | lineage4.8.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR349299 | Other | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR323037 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR363447 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR29017081 | Sensitive | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | SRR6045832 | Other | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR5535933 | Other | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None |
---|