Rv0006 - c.1038A>C


Drug resistance types
10 Sensitive 2 RR-TB 29 HR-TB 7 MDR-TB 2 Pre-XDR-TB 2 XDR-TB 36 Other
lineage Counts
lineage Count
M.canetti;lineage4.9 2
lineage6.1.3 1
lineage4.9 35
La1.7;lineage4.9 4
lineage3 1
lineage2.2.1 6
lineage1.2.1.2 1
M.canetti;lineage2.2 2
lineage2.2.1.2;lineage7 1
lineage4.5 1
lineage2.2.1.2 2
lineage3.1.2.1 1
lineage4 2
lineage4.8.1 1
lineage4.3.4.2.1 3
lineage4.6.2.2 2
lineage4.2;lineage4.8.1;lineage4.9 1
La1;lineage4.1.2 1
lineage2.2 4
La1.2 1
2
lineage4.1;lineage4.8 2
M.canetti;lineage2.2.2;lineage6.2 2
La1.7.1 1
La1;lineage4.9 2
La1.7;lineage4.2 1
lineage4.9;lineage6.1.3 1
La1.7.X-unk4;lineage4.9 1
La2;lineage2.2 1
lineage4.8 1
La2;lineage4.9 1
lineage4.1.2.1 1
spoligotype Counts
spoligotype Count
None 88
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR9787153 Other lineage6.1.3 None
SRR26331611 Sensitive lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR1181289 Other lineage2.2.1 None
SRR12006550 Sensitive lineage1.2.1.2 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR1180137 Other lineage2.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR752229 Other lineage4.5 None
SRR28351584 HR-TB lineage2.2.1 None
SRR3675270 Other lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
SRR29096943 Sensitive lineage3.1.2.1 None
SRR6045053 Other lineage4 None
SRR6046046 Other lineage4.9 None
ERR11465604 HR-TB lineage4.8.1 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR3797015 HR-TB lineage4.9 None
SRR29096879 Sensitive lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4769450 Other lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR3797046 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR23961549 Other La1.2 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR9786843 Other None
ERR9786525 Other lineage4.1;lineage4.8 None
ERR4819241 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1183049 RR-TB lineage2.2 None
ERR9119669 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR20969708 HR-TB lineage2.2 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR1181020 Other lineage2.2.1 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR4769521 RR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4815441 HR-TB lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR5341456 Other lineage4.9 None
ERR212001 HR-TB None
ERR4769497 Other La1;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4819422 HR-TB lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4818929 HR-TB lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR5535933 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6045548 Sensitive lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR11465015 Sensitive lineage4.3.4.2.1 None
ERR4816478 HR-TB lineage4 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None