EBG00000313339 - n.1848G>A


Drug resistance types
99 Sensitive 49 RR-TB 130 HR-TB 130 MDR-TB 20 Pre-XDR-TB 4 XDR-TB 286 Other
lineage Counts
lineage Count
La1.8.1 8
lineage2.2 6
lineage4.8 12
M.canetti;lineage2.1;lineage4.9 14
lineage4.9 240
La1.7;lineage4.9 5
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.2.1 36
lineage3 12
lineage2.1 5
La3;M.canetti;lineage2.1;lineage4.9 11
lineage3.1.2 1
lineage4.3.3 10
lineage2.2.1 43
La1.7;lineage4.9;lineage7 3
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.9;lineage6.3 8
lineage4.3.4.2.1 10
lineage4.6.4 2
M.canetti;lineage2.2 3
La2;lineage4.9 2
lineage4.3.2.1 3
lineage4.3.4.1 8
lineage2.1;lineage4.9 14
M.canetti;lineage4.9 2
lineage2.2.1.1 9
La3;lineage4.9 12
lineage2.2.1;lineage6.3 1
lineage4 5
lineage4.9;lineage6.1.3 1
lineage4.4.1.1 6
lineage2.1;lineage4.9;lineage6.3 8
La3;M.canetti;lineage4.8;lineage4.9 1
lineage1.2.2.1 1
lineage1;lineage4.9 1
lineage4.1.1.3 14
lineage5.2 4
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
lineage1.1.3.2 1
lineage4.7 2
lineage4.3.2 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage2.2;lineage4 1
La1.7.1;lineage4.9 1
lineage4.2.1 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.8;lineage4.9 3
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.2.1.2 2
La3;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage4.6.3;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.6.1.1 3
lineage2.2.1;lineage3 1
lineage4.3.4.2 3
lineage4.9;lineage9 2
lineage4.1;lineage4.8 2
M.canetti;lineage2.2.2;lineage6.2 2
lineage1.1.2 3
La1.2;La1.8.1 1
lineage4.1.3 2
lineage4.1.2 2
lineage4.6.2.2 6
lineage3.1 1
La1.7.1;La1.7.X-unk4 1
lineage4.5 3
lineage2.1;lineage4.1.1.1;lineage6.3 2
La1;lineage4.9 4
lineage4.1.1.1 4
lineage4.3.2;lineage4.9 1
lineage1.2.2.1;lineage4.4.1.1 2
lineage6 1
lineage4.3.1;lineage4.9;lineage6 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;lineage4.8 1
La1;lineage4.1.2 1
lineage4.9;lineage7 2
lineage4.8.1 1
La1.7 1
lineage4.2;lineage4.9 1
lineage4.3.3;lineage4.3.4.2 1
M.canetti;lineage2.1 1
lineage4.1;lineage4.9 2
lineage6.1.2 1
lineage3;lineage4.9 1
La3;lineage3 1
La1;lineage2;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage6.1.1 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.1 1
lineage2.2.1.2;lineage7 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La2;lineage4.9;lineage9 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 2
lineage4.1.2.1.1 1
La3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7;lineage4.3.4.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.1 1
lineage4.9.1 1
lineage2.1;lineage4.3.2 1
La3;lineage2 1
lineage1.2.2.2 2
La3;lineage2.1;lineage4.9 3
lineage5.1.2 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage6.1.3 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.2 1
lineage4.1.1.3;lineage4.9 2
La1.2.BCG 2
lineage4.4.2 1
lineage1.1.3.1 1
26
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage3.1;lineage9 1
La3;M.canetti;lineage4.9 2
La3;lineage2.1;lineage6.3 1
lineage6.3.1 1
La2;lineage2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
La3;M.canetti;lineage3.1 1
lineage6.2.3 1
lineage4.2.1.1;lineage4.3.3 1
lineage2.1;lineage2.2;lineage6.3 1
La1.2 2
M.canetti;lineage2.1;lineage4 1
lineage2.1;lineage6.3 1
La3;lineage2.2.1 1
lineage1.2.1.2.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
La1.7.1 2
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La1.7;lineage4.9;lineage6 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.4 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.2 1
lineage2.2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage4.6.1.2 1
spoligotype Counts
spoligotype Count
None 718
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR12015086 RR-TB lineage4.8 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926165 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4178309 Other lineage4.1.2.1 None
ERR9896144 Other lineage3 None
ERR702406 Other lineage2.1 None
ERR926156 Other lineage4.9 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
SRR5341400 Sensitive lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
SRR1173218 Other lineage4.3.3 None
SRR1181020 Other lineage2.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR369163 Other lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR3675210 Sensitive lineage4.9 None
ERR1213873 MDR-TB lineage4.3.4.2.1 rw
ERR4872102 MDR-TB lineage4.6.4 None
ERR323115 Sensitive lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
ERR1035297 MDR-TB lineage4.3.4.1 br
ERR3283019 Other lineage2.1;lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR970443 RR-TB lineage2.2.1.1 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR11466072 Sensitive lineage4.3.4.2.1 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
ERR4831839 MDR-TB lineage2.2.1 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4798823 HR-TB lineage4 None
ERR4821655 HR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR23961529 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3797019 Other La1.8.1 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1173118 Other lineage2.2.1 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR126607 Sensitive lineage1.2.2.1 mw
ERR323045 HR-TB lineage1;lineage4.9 None
SRR6785227 Other lineage2.2.1 None
SRR1173384 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR4872094 MDR-TB lineage5.2 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1173562 Sensitive lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR4814639 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR7821123 Other lineage1.1.3.2 None
ERR3273109 HR-TB lineage4 None
ERR2446566 Other lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR9786507 RR-TB lineage4.7 None
ERR4799513 HR-TB lineage2.2 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR1213930 Other lineage4.3.2 pe
ERR2229143 RR-TB lineage4.9 None
ERR3797070 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR5431730 Other La1.8.1 None
ERR867544 Other lineage4.9 None
ERR2517489 Sensitive lineage4.1.2.1 nl
SRR6045706 Other lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR11972306 Pre-XDR-TB lineage2.2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR108471 HR-TB lineage4.9 None
SRR8692863 Other lineage2.2;lineage4 None
ERR12015084 Other lineage4.8 None
ERR4819877 HR-TB lineage4.9 None
SRR9613550 HR-TB lineage4.1.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR10808399 Sensitive lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR5341453 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR1035294 MDR-TB lineage4.1.2.1 br
ERR3283010 Sensitive La1.8.1 None
ERR369160 Sensitive lineage4.9 None
SRR1175049 Other lineage4.8;lineage4.9 None
ERR363502 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR14782405 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR363453 Other lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR1172234 Other lineage4.9 None
SRR13861400 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR5341455 Sensitive lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
SRR5341467 Other lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR4872077 Pre-XDR-TB lineage5.2 None
SRR5341425 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR11465024 Other lineage4.1.1.3 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1196677 Other lineage2.2 None
ERR6866410 HR-TB lineage4.9 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR12268496 Sensitive lineage4.4.1.1 None
ERR3797015 HR-TB lineage4.9 None
SRR1173633 Other lineage4.9 None
ERR11466044 Other lineage4.1.1.3 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR15600376 HR-TB lineage2.2.1.1 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
SRR1791696 RR-TB La1.8.1 None
ERR990545 RR-TB lineage3 None
SRR5341300 HR-TB lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4799025 Other lineage4.8 None
SRR1184312 Other lineage2.2.1 None
ERR369161 Sensitive lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4816762 Sensitive lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
ERR3797023 MDR-TB La1.8.1 None
ERR9119483 Pre-XDR-TB lineage5.2 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR3675232 Other lineage4.1.2.1 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR373946 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR502912 Other lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR182014 Sensitive lineage4.1.2 mw
ERR124636 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR926158 Sensitive lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR4816470 HR-TB lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR1175508 Sensitive lineage4.9 None
ERR926160 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR4811031 Other lineage4.5 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3283032 Other lineage4.9 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR3283011 Other La3;lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR1181328 Other lineage2.2.1 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR1180996 Other lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR5917710 RR-TB lineage4.1.2.1 None
SRR3675318 Other lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR1035122 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR1213875 Sensitive lineage4.3.3 de
SRR6046540 Other lineage2.1;lineage4.9 None
SRR1173153 Other lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
SRR3675221 Other lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR323107 HR-TB lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR21732980 Other lineage4.3.3 None
ERR176751 HR-TB lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1183111 HR-TB lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR9787362 Sensitive lineage6 None
ERR4817731 HR-TB lineage4.9 None
SRR13423544 Other lineage4.5 None
ERR11466174 Other lineage4.8 None
SRR3675541 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR1181289 RR-TB lineage2.2.1 None
ERR3283014 Other La3;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR363490 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR6044875 Other lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR926164 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR5341437 Sensitive lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9786694 Other lineage4.1.2.1 None
SRR3675514 Sensitive lineage4.9 None
ERR11466499 Other lineage4.3.4.1 None
ERR12015083 Other La3;lineage4.8 None
SRR1165628 Other La3;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR1173484 Sensitive lineage4.9 None
SRR3675222 Other La1.7 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR1034911 MDR-TB lineage4.3.3;lineage4.3.4.2 pt
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR3283040 HR-TB lineage4.9 None
SRR1180137 RR-TB lineage2.2.1 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR12416840 MDR-TB lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
ERR3468607 RR-TB lineage4.9 None
SRR13861332 Other lineage4.9 None
ERR970413 MDR-TB lineage2.2.1 None
ERR4815752 Other lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR9787030 RR-TB lineage6.1.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR11465152 Sensitive lineage4.3.4.1 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4813861 Other lineage4.3.3 None
SRR12708419 Other lineage4.3.3 None
SRR5341396 Other lineage3;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR3675482 RR-TB lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR363474 Sensitive lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR7535082 Other lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
ERR1023302 MDR-TB La3;lineage3 None
ERR926154 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR736848 Other lineage4.9 None
ERR11466242 Sensitive lineage4.1.1.3 None
ERR926157 Other lineage4.9 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR3283044 Other lineage4 None
SRR1180226 HR-TB lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR067712 Sensitive lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR11138607 Pre-XDR-TB lineage2.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
SRR15368973 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR2027263 Other lineage4 None
SRR16156817 Other lineage4.9 None
SRR1173706 Other lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR3799304 RR-TB lineage6.1.1 None
SRR7236177 Other La1.8.1 None
SRR26159043 Other lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR323066 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR22424787 Sensitive lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR3797063 Other La3;lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR400336 Sensitive lineage4.9 None
ERR11465801 Other lineage4.3.4.1 None
ERR4811030 Other lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1063849 HR-TB lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR400326 Other lineage4.9 None
ERR11465151 Sensitive lineage4.3.4.1 None
SRR1166821 RR-TB lineage4.1.2.1 None
SRR7496472 Other lineage4.9 None
ERR349264 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR1196474 Other lineage3.1.1 None
ERR323062 HR-TB lineage4.9 None
SRR6785263 Sensitive lineage2.2.1 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR363498 Other lineage4.9 None
ERR926163 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR9786443 Sensitive lineage4.8 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR10808490 Sensitive lineage2.2.1.1 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
SRR1196566 Other lineage4.9 None
SRR3675448 Other lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR4816100 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
SRR12708409 HR-TB lineage4.3.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR1172728 RR-TB La3 None
SRR5341296 Sensitive lineage4.9 None
ERR867540 MDR-TB lineage2.2.1 None
ERR8665994 RR-TB lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR1181091 Other lineage2.2.1.1 None
ERR4812155 Other lineage4.9 None
ERR363445 Other lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR133825 HR-TB La1;lineage4.9 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR3275215 RR-TB lineage4.1.2.1 nl
ERR9786611 HR-TB lineage4.1.3 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
SRR6045158 Other lineage4.9 None
ERR9786440 Other lineage4.1 None
SRR1172844 Sensitive lineage4.9 None
ERR473332 Other lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR1162864 MDR-TB lineage4.1.2.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR20969677 HR-TB La3;lineage2 None
ERR4797184 HR-TB lineage4.9 None
ERR11465906 Sensitive lineage4.4.1.1 None
ERR3797046 HR-TB lineage4.9 None
ERR11081258 Other lineage4.8 None
SRR3675389 Other lineage4.9 None
ERR363447 Other lineage4.9 None
SRR1158918 Other lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR369156 Sensitive lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR373947 Other lineage4.9 None
SRR3416776 Other lineage2.1 None
SRR1173777 Sensitive lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR400538 RR-TB lineage5.1.2 None
SRR11972367 Sensitive lineage2.2.1 None
ERR2509673 Other lineage2.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR9787165 Other lineage6.1.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR23961559 Other La1.7;lineage4.2 None
ERR502510 HR-TB lineage4.9 None
ERR363500 Other lineage4.9 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675243 MDR-TB lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR6865513 Other lineage4.1.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR1034634 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR1915487 Other La1.2.BCG None
ERR9786645 Other lineage4.6.2.2 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR349266 Other lineage4.9 None
ERR2199988 MDR-TB lineage4.1.1.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR369159 Other lineage4.9 None
DRR188519 Other lineage4.4.2 None
SRR1173788 Sensitive lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR8692887 Other None
SRR8692905 Sensitive None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
SRR1175074 Other None
SRR28351341 Other lineage4.1.1.1 None
ERR11252664 Other lineage2.2.1 None
SRR1640750 RR-TB None
ERR234659 HR-TB None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR25827682 Other None
SRR1172857 Other None
SRR7496517 Other None
ERR9787197 Other None
SRR12708416 Sensitive None
ERR11082350 MDR-TB lineage4.6.2.2 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR349300 Other lineage4.9 None
ERR6866807 RR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR9971114 Other lineage2.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR176651 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR373945 Other lineage4.9 None
SRR13861224 Sensitive lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR3675507 RR-TB lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR5341330 Other lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR369157 Sensitive lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4798099 HR-TB lineage4.9 None
ERR363499 Other lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
ERR369151 Other lineage4.9 None
ERR2446118 RR-TB lineage4.1.2.1 nl
ERR702405 HR-TB lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR212033 Other lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1183049 RR-TB lineage2.2 None
SRR6045217 Other lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR550637 MDR-TB lineage4.1.1.3 None
SRR26399973 Other La3;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR926172 Sensitive lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR736834 HR-TB lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341395 Sensitive lineage3 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR5341299 HR-TB lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926155 Other lineage4.9 None
ERR363479 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR4407452 Other lineage3 None
ERR4815815 Sensitive lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR11465279 Sensitive lineage4.3.4.1 None
ERR9119096 RR-TB lineage4.3.3 None
SRR20970016 Other lineage2.2 None
SAMN02403525 Pre-XDR-TB lineage4.1.1.3 None
ERR363446 Other lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
ERR4814683 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
SRR3675572 Other None
ERR11252548 Other lineage1.2.2.2 None
ERR1063896 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR9786843 Other None
ERR11252612 Other La3;lineage4.9 None
SRR6789626 Other None
SRR28351488 MDR-TB lineage2.2.1 None
ERR11252736 Other lineage4.9 None
SRR7535086 Other None
ERR212001 HR-TB None
SRR28119777 Other lineage4.9 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786597 Other lineage4.6.2.2 None
ERR9787061 Sensitive lineage6.2.3 None
SRR1173587 Pre-XDR-TB lineage4.1.1.3 None
ERR752229 Other lineage4.5 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR1196583 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
SRR11444077 Sensitive lineage4.6.2.2 None
ERR736872 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR779852 HR-TB lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR13861235 HR-TB lineage4.9 None
ERR502908 HR-TB lineage2.2.1 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR4769427 Other La1.2 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR13423649 Other lineage2.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR5341298 Other lineage4.9 None
SRR1710057 Other lineage2.1 None
SRR10808668 Other lineage2.2.1 None
ERR12015085 Other lineage4.8 None
ERR363421 Other lineage4.9 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11465665 Other lineage4.1.1.3 None
ERR9787014 RR-TB lineage6.1.1 None
ERR400320 Sensitive lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786619 Sensitive lineage4.8 None
ERR349296 Sensitive lineage4.9 None
SRR1173355 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR1162740 Other lineage4.1.2.1 None
ERR3283055 HR-TB lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR1172817 Other La3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR212125 HR-TB lineage4.9 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
SRR1167271 MDR-TB lineage4.1.1.3 None
ERR5908228 RR-TB lineage4.3.3 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR3275196 RR-TB lineage2.2.1 nl
SRR1183144 RR-TB lineage2.2.1 None
ERR4819241 Other lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
ERR11465360 MDR-TB lineage4.3.4.1 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6045503 Other lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675209 Sensitive lineage4.9 None
ERR970445 MDR-TB lineage2.2.1 None
SRR7496523 Other lineage4.7 None
ERR9786617 Other lineage4.1.1.1 None
SRR1165584 Other lineage4.1.2.1 None
ERR4811493 HR-TB lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
SRR7496509 Other None
ERR9786671 Other None
SRR18289200 Other lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR1173363 Other None
SRR1184372 MDR-TB None
ERR4796577 HR-TB None
SRR23961540 Other La1.7.1 None
SRR28044634 Other lineage3 None
ERR987722 MDR-TB None
ERR4407463 HR-TB None
SRR28119805 Other lineage4.9 None
SRR1196768 MDR-TB None
ERR400529 Other lineage3 None
SRR13861288 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR6358979 HR-TB lineage4.9 None
ERR369162 Other lineage4.9 None
ERR9786639 Sensitive lineage4.8 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR363449 Other lineage4.9 None
SRR3743401 MDR-TB lineage2.2.1 None
SRR1165306 Pre-XDR-TB lineage4.1.1.3 None
SRR13861510 Other lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1175127 Other lineage2.2.1.2 None
ERR9119508 MDR-TB lineage4.6.4 None
ERR736817 HR-TB lineage4.3.4 None
SRR23961549 Other La1.2 None
SRR3675549 Other lineage4.9 None
ERR1213874 MDR-TB lineage2.2.1 kr
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR11466070 Sensitive lineage4.3.4.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR369158 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
ERR11465597 Sensitive lineage4.1.2.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18910194 HR-TB lineage2.2.2 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR11465025 Other lineage4.1.1.3 None
ERR2124083 HR-TB lineage4.6.1.2 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR11462861 Other La1.8.1 None
ERR9786592 Other lineage4.3.4.2 None
ERR3797083 RR-TB lineage4.9 None
SRR1169194 Other lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None