Rv1484 - c.600T>C


Drug resistance types
41 Sensitive 9 RR-TB 86 HR-TB 24 MDR-TB 5 Pre-XDR-TB 2 XDR-TB 153 Other
lineage Counts
lineage Count
lineage2.2.1.1 3
lineage4.9 99
lineage2.2 4
lineage4.6.3;lineage4.9 3
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6 1
18
lineage3 3
lineage2.1;lineage4.9;lineage6.3 10
lineage4.9;lineage7 2
lineage2.2.1 11
lineage4.1;lineage4.8 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;lineage4 1
lineage4.9;lineage6.3 10
lineage2.1;lineage4.9 11
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.6.2.2 5
M.canetti;lineage4.2;lineage4.9 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.3.4.2.1 2
La3;lineage2 1
M.canetti;lineage2.2.2;lineage6.2 2
La3;lineage2.1;lineage4.9 3
La2;lineage2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.1.2.1 5
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.7;lineage4.9;lineage7 3
M.canetti;lineage4.9 3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La2;lineage4.9 2
lineage2.2.2 1
La1.6;La3;lineage4.9 2
lineage1.1.2 2
La1.7;lineage3.1;lineage4 1
lineage3.1.2.2 1
lineage4.9;lineage9 2
lineage4.3.2.1 1
lineage4 4
lineage1.2.2.2 1
lineage2.1 5
lineage2.1;lineage6.3 2
lineage4.4.1.2 1
lineage4.3.4.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage6.1.1 2
lineage2.2.1;lineage4.1.2.1 1
lineage3.1.2.1 1
lineage3.1 1
lineage4.2;lineage4.8.1;lineage4.9 2
La1.2.BCG 1
lineage4.2;lineage4.9 3
lineage4.3.2;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
lineage1.2.1.2 1
lineage4.8 1
La3;lineage4.9 4
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 2
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage1;lineage4.9 1
lineage4.2.2.2 1
La3;lineage4.3.4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1;lineage4.9 2
lineage4.1.1.1 1
lineage4.7 1
La2;lineage4.9;lineage9 1
La1.7.1;lineage4.9 1
La1.8.1 1
La3 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage4.2 1
La1.2 1
lineage1.1.1 1
La1.7;lineage4.9 1
M.canetti;lineage2.2 2
lineage4.5 1
lineage2.2.1.2 2
lineage3.1.2.1;lineage3.1.2.2 1
lineage6.3.1 1
La3;M.canetti;lineage2.2.1 1
La3;lineage1.1.2 1
lineage4.1.2 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.1;lineage6.3 1
La3;lineage2.2.1 2
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.1.3 2
La1;lineage4.1.2 1
lineage6.1.3 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.4.1.1 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.7;lineage3;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 320
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1183106 RR-TB lineage2.2.1.1 None
SRR29097037 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR11268039 Other La1.6 None
ERR987722 MDR-TB None
ERR4817060 Other None
SRR28044873 Pre-XDR-TB lineage3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4819781 Other lineage2.2.1 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR926165 Sensitive lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR6866807 Other lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819241 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR11082350 MDR-TB lineage4.6.2.2 None
SRR1196583 Other lineage4.9 None
SRR28351584 HR-TB lineage2.2.1 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR20969677 HR-TB La3;lineage2 None
SRR1175074 Other None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675214 Other lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR18003019 Other lineage2.2.1 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR736848 Other lineage4.9 None
ERR4816585 Other lineage2.2 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341293 Sensitive lineage4.9 None
ERR13278785 MDR-TB lineage4.6.2.2 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736856 Sensitive lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR1173384 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR3797015 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR21733183 RR-TB lineage1.1.2 None
SRR29097058 Other lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR29050859 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR926161 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4815441 HR-TB lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR3283044 Other lineage4 None
ERR3283032 Other lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4797201 Other lineage1.2.2.2 None
SRR29096107 Sensitive lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR12416842 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
ERR926164 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR4797193 HR-TB lineage1.1.2 None
SRR1172234 Other lineage4.9 None
ERR176751 Other lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3799304 Other lineage6.1.1 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR4800102 Sensitive lineage3.1.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR29016780 Other lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR4798262 HR-TB La1.2.BCG None
ERR3797070 Other lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
ERR2514692 Other None
SRR1172857 Other None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
ERR4814352 Other lineage2.2.1 None
SRR10808730 Other lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
SRR19295647 Sensitive lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
ERR9786639 Sensitive lineage4.8 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6046382 Sensitive lineage2.2.1 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR3283042 Other lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818929 HR-TB lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR5341373 Other lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR18213713 HR-TB None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR1063896 Sensitive None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1710057 Other lineage2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4188247 HR-TB lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR29096425 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR2027263 Other lineage4 None
SRR5341330 Other lineage4.9 None
ERR212123 Other lineage4.9 None
ERR4816999 Other None
ERR2513470 Other lineage4.2.2.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR926158 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR28119753 Other lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
SRR29093909 Other lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR9786507 RR-TB lineage4.7 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
SRR29097023 Sensitive lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR212138 HR-TB lineage4.9 None
ERR3797073 Other La1.8.1 None
ERR4800341 Other lineage3 None
ERR4816466 HR-TB lineage4.9 None
SRR1172728 RR-TB La3 None
ERR971389 Sensitive lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR9117709 Other None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
SRR29096150 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR29097026 Other lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR5311094 HR-TB lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR23961559 Other La1.7;lineage4.2 None
SRR23961549 Other La1.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1183144 Other lineage2.2.1 None
SRR7496472 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR9786843 Other None
SRR1184381 MDR-TB None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR212001 HR-TB None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR3283055 HR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR926156 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR9786604 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR29096410 Other lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR1196768 MDR-TB None
ERR752229 Other lineage4.5 None
ERR3283040 HR-TB lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797029 Other lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR4810624 MDR-TB lineage2.2 None
SRR1175127 Other lineage2.2.1.2 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR6044875 Sensitive lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR3797069 Other lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1173355 Other lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4820773 HR-TB lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
SRR29016901 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR26399490 Sensitive lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR6789626 Other None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4798504 RR-TB lineage3 None
ERR161037 Other lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR108471 HR-TB lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159035 Sensitive lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR8217918 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR14782405 HR-TB lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR12416840 MDR-TB lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR3797046 HR-TB lineage4.9 None
ERR9787153 Other lineage6.1.3 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR29097054 Sensitive lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None