Rv2477c - c.415_417delGCGinsTC
Drug resistance types
5 Sensitive
4 RR-TB
33 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;M.canetti;lineage4.9 | 2 |
| La1.7;lineage4.9 | 5 |
| lineage4.9 | 34 |
| lineage1.1.1 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2.2.1 | 3 |
| lineage2.2 | 4 |
| La3;lineage4.9 | 3 |
| La1;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.3.4.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage6.1.3 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La1.7 | 2 |
| lineage4.4.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.1;lineage4 | 1 |
| lineage4.3.4 | 1 |
| lineage4.1.2 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| lineage4.3.2.1 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 73 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR5341330 | Other | lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR4815471 | HR-TB | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR736831 | Other | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR11465361 | MDR-TB | lineage4.3.4.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR4816964 | HR-TB | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR5535933 | Other | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None |
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