lineage | Count |
---|---|
lineage4.9 | 5 |
lineage3 | 2 |
lineage3.1.1 | 1 |
7 | |
lineage2.2.1 | 3 |
lineage4.4.2 | 1 |
La1 | 1 |
La1.2 | 1 |
lineage4 | 2 |
lineage4.5 | 1 |
lineage2.2 | 2 |
lineage4.8;lineage4.3.3 | 4 |
lineage2.2.1.2 | 2 |
lineage7;lineage2.2.1.2 | 1 |
spoligotype | Count |
---|---|
None | 33 |
ID | Drug resistance | Lineage | Country iso2 | ERR2693238 | HR-TB | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816470 | Other | lineage3 | None | ERR2245355 | Sensitive | lineage3.1.1 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR5535933 | HR-TB | None | ERR4831117 | HR-TB | None | SRR9971270 | RR-TB | lineage2.2.1 | None | DRR188519 | Other | lineage4.4.2 | None | ERR3283025 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3797046 | HR-TB | None | ERR3283055 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR752229 | Other | lineage4.5 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR21677886 | Sensitive | lineage4.9 | None |
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