Rv0006 - c.558A>G


Drug resistance types
12 Sensitive 2 RR-TB 47 HR-TB 4 MDR-TB 2 Pre-XDR-TB 2 XDR-TB 101 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 6
lineage4.9 42
lineage4.9;lineage6.1.3 1
7
lineage4.2;lineage4.9 2
lineage2.1;lineage4.9;lineage6.3 8
lineage2.2.1.2;lineage7 1
lineage4.5 1
lineage4.6.1.1 3
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1.2 2
lineage4.9;lineage6.3 7
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage6.3.1 1
La3;lineage2.1;lineage4.9 3
lineage2.1;lineage6.3 2
lineage4 2
lineage4.3.1;lineage4.9;lineage6 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2 4
La1.2;La1.8.1 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.1.2.1 1
lineage3 3
M.canetti;lineage2.1;lineage4.9 2
lineage2.2.1 7
La1.7;lineage4.2 1
lineage4.8 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.7;lineage4.9 4
La3;lineage2.1;lineage4.9;lineage6.3 3
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.9 4
La1.7.1 1
La1.6;La3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.9 4
lineage2.2.1;lineage6.3 1
La1.7;M.canetti;lineage4.9 3
La1.7.1;La1.7.X-unk4 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.7.1;lineage4.9 1
lineage2.2.1.1 2
lineage5.2 2
lineage2.1 2
lineage4.4.1.2 1
lineage4.9;lineage7 1
lineage4.8.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 1
La1.2.BCG 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;M.canetti;lineage2.2.1 1
lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La3 1
M.canetti;lineage2.1;lineage6.3 1
lineage1.1.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 170
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4407463 HR-TB None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR752229 Other lineage4.5 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR18213713 HR-TB None
SRR1175127 Other lineage2.2.1.2 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR6045053 Other lineage4 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR6045548 Sensitive lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4816585 Other lineage2.2 None
ERR2027263 Other lineage4 None
SRR26399490 Sensitive lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR4769457 Other lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR28119753 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR6044942 HR-TB lineage4.9 None
ERR990545 Other lineage3 None
SRR7535086 Other None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR14782405 HR-TB lineage4.9 None
SRR1180172 Other lineage2.2.1 None
ERR3797046 HR-TB lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR23961559 Other La1.7;lineage4.2 None
ERR4816151 Sensitive lineage4.8 None
SRR6046485 Other lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR3797070 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786843 Other None
SRR28119805 Other lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR1181289 Other lineage2.2.1 None
SRR6045555 Other lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR1180137 Other lineage2.2.1 None
SRR1173778 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
SRR6046046 Other lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046593 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR3675236 Other None
SRR29017461 Other La3;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR4800341 Other lineage3 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR28119777 Other lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR702406 Other lineage2.1 None
SRR6046594 Sensitive lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1183144 Other lineage2.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR6045233 Other M.canetti;lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR212001 HR-TB None
SRR28044873 Pre-XDR-TB lineage3 None
ERR4814352 Other lineage2.2.1 None
SRR12142341 HR-TB lineage2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1167384 Other La3;lineage4.9 None
SRR6044838 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR6045217 Sensitive lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR11252736 Other lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4799025 Other lineage4.8 None
SRR6045526 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR1172728 RR-TB La3 None
ERR473332 Other lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
SRR14066533 Sensitive lineage1.1.1 None
ERR9119500 MDR-TB lineage5.2 None
ERR234659 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4819781 Other lineage2.2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None