Rv0407 - c.781_782delAGinsTC
Drug resistance types
12 Sensitive
1 RR-TB
27 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage4.9 | 5 |
| lineage4.9 | 41 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage2.2.1.2 | 1 |
| lineage2.2 | 3 |
| lineage3 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage3.1.2.1;lineage4 | 1 |
| lineage4 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 67 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR473332 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR29017081 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR5535933 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | SRR29096178 | Sensitive | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR29096784 | Sensitive | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR4769452 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR6046046 | Other | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | ERR176651 | Other | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR181887 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None |
|---|
