Rv0407 - c.781_782delAGinsTC
Drug resistance types
10 Sensitive
0 RR-TB
50 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 7 |
| 39 | |
| lineage4 | 15 |
| lineage2.2.1 | 2 |
| La1.8.1 | 1 |
| La1.2 | 1 |
| lineage2.2 | 3 |
| lineage4.3.4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.1 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 75 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2660539 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR3283031 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR323045 | HR-TB | None | ERR1063862 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046492 | Other | None | ERR4831117 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797060 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR702404 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6866410 | Sensitive | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736875 | HR-TB | lineage4 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR176778 | HR-TB | None | ERR176651 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR181887 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | ERR2446566 | Other | lineage4.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR3675571 | HR-TB | None | SRR5341456 | Other | None |
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