lineage | Count |
---|---|
lineage4 | 12 |
lineage4.9 | 19 |
27 | |
lineage3 | 1 |
lineage4.1 | 1 |
lineage2.2.1 | 4 |
lineage4.7 | 1 |
La1.2 | 1 |
lineage2.2 | 3 |
lineage2.2.1.2 | 2 |
lineage7;lineage2.2.1.2 | 1 |
lineage4.5 | 1 |
lineage4.4.1.1.1 | 1 |
spoligotype | Count |
---|---|
None | 74 |
ID | Drug resistance | Lineage | Country iso2 | SRR8692790 | RR-TB | lineage4 | None | SRR8692899 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR8692905 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341330 | HR-TB | None | SRR5341456 | Other | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | SRR3675270 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5535933 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046299 | HR-TB | None | SRR6046046 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR6046492 | Other | None | SRR6046878 | HR-TB | lineage4 | None | SRR7496523 | Other | lineage4.7 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | SRR7496471 | Sensitive | None | ERR3283028 | Other | None | ERR108471 | HR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797046 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR736831 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR736837 | Other | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None |
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