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SRA data
EBG00000313339
- n.1404C>T
Drug resistance types
53 Sensitive
16 RR-TB
133 HR-TB
75 MDR-TB
14 Pre-XDR-TB
3 XDR-TB
223 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
129
lineage4.1.2.1
25
lineage2.2.1
25
La3;lineage4.9
16
15
lineage2.1;lineage4.9
15
M.canetti;lineage2.1;lineage4.9
15
La3;M.canetti;lineage2.1;lineage4.9
12
lineage4.8
11
lineage3
8
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
517
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR188519
Other
lineage4.4.2
None
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR067681
MDR-TB
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
None
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR1034634
HR-TB
lineage4.9
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1034902
Pre-XDR-TB
lineage4.3.4.2
pt
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR1035157
Other
lineage4.9
None
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