EBG00000313339 - n.1404C>T


Drug resistance types
32 Sensitive 38 RR-TB 95 HR-TB 123 MDR-TB 14 Pre-XDR-TB 3 XDR-TB 178 Other
lineage Counts
lineage Count
lineage4.9 111
lineage2.1;lineage4.9 15
M.canetti;lineage2.1;lineage4.9 15
M.canetti;lineage2.2 3
La1.7;M.canetti;lineage4.9 1
lineage3 8
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.1.2.1 25
lineage1.1.2 3
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage4.3.4.2.1 6
lineage6.3.1 1
lineage4.1.2.1.1 2
lineage4.6.2.2 7
lineage2.1;lineage4.9;lineage6.3 8
lineage4.1.1.3 2
lineage6.1.1 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;M.canetti;lineage4.9 2
La3;lineage4.9 13
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.2 5
lineage4.3.3 5
lineage2.2.1.1 5
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.8 10
lineage4.3.4.1 6
lineage2.1 3
La3;M.canetti;lineage2.1;lineage4.9 12
M.canetti;lineage4.9 2
lineage2.2.1;lineage6.3 1
La1.6;La3;lineage4.9 2
lineage4.9;lineage6.1.3 1
lineage4.4.1.1 3
M.canetti;lineage2.1;lineage4.9;lineage6.3 2
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage3.1 1
lineage1;lineage4.9 1
lineage3.1.2.2 1
La3;lineage4.3.4 1
La3;lineage2.1;lineage4.9;lineage6.3 3
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.9;lineage6.3 6
lineage4.2.1 1
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.7;lineage4.9 7
lineage2.2.1.2;lineage7 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.5 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.3.1;lineage4.9;lineage6 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.1 1
lineage2.2.1.2 2
lineage2.2.1 22
lineage4.9;lineage7 4
lineage4.8.1 1
lineage4.2;lineage4.9 1
M.canetti;lineage2.1 1
lineage1.1 1
lineage4.1.1.1 4
La3;lineage4 1
La1;lineage4.9 2
La1.2.BCG 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage4.6.4 2
M.canetti;lineage2.1;lineage4 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 3
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage4.3.4.2 2
lineage4.6.1.2 1
lineage4.9.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4 2
La1.8.1 2
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage3 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage1.1.3.2 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.1;lineage4.8 2
La2;lineage4.9;lineage9 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
La1.7.1;lineage4.9 1
La1.7;lineage4.9;lineage7 3
La2;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
La3 2
lineage1.1.1 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.1.3 2
lineage5.2 2
La3;lineage4.8 1
lineage1.2.2.2 2
La3;lineage2.2.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage6.1.3 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.2 1
M.canetti;lineage4.2 1
La1.7.1 2
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.4.2 1
M.canetti;lineage4.9;lineage9 1
14
lineage4.6.3;lineage4.9 1
La3;lineage2.1;lineage6.3 1
La1.2 3
lineage4.3.4 1
lineage2.1;lineage2.2;lineage6.3 1
La2;lineage2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.1;lineage6.3 1
lineage3.1.2 1
lineage4.6.1.1 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.9;lineage9 2
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage1 1
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.1;lineage4.3.2 1
La3;lineage2 1
lineage2.2.1;lineage4.1.2.1 1
lineage4.4.1.2 1
lineage6.1.2 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 483
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4819051 Sensitive lineage4.9 None
SRR3675502 Sensitive lineage4.9 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR176651 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR1165506 Other lineage4.1.2.1 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None
ERR4872096 MDR-TB lineage4.6.2.2 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046492 Other lineage4.9 None
ERR11465665 Other lineage4.1.1.3 None
ERR9787014 RR-TB lineage6.1.1 None
ERR9786384 Sensitive lineage4.1.2.1 None
SRR1173355 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR1169194 Other lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR926165 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675482 RR-TB lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1196677 Other lineage2.2 None
SRR1167384 Other La3;lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR1173633 Other lineage4.9 None
SRR1173218 Other lineage4.3.3 None
ERR387051 RR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
SRR15600376 HR-TB lineage2.2.1.1 None
ERR736848 Other lineage4.9 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
ERR926157 Other lineage4.9 None
ERR990545 RR-TB lineage3 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4799025 Other lineage4.8 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1035297 MDR-TB lineage4.3.4.1 br
SRR12142341 HR-TB lineage2.1 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR17832802 HR-TB lineage3 None
ERR4769521 RR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3797063 Other La3;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR28119823 Sensitive lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR11465151 Sensitive lineage4.3.4.1 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR1166821 RR-TB lineage4.1.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR736875 HR-TB lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6785268 Sensitive lineage4.2.1 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR1213875 Sensitive lineage4.3.3 de
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797081 Sensitive lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR13423544 Other lineage4.5 None
ERR3801503 Other lineage4.6.2.2 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR8665994 RR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1035294 MDR-TB lineage4.1.2.1 br
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR4816656 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR5341293 Sensitive lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR9786440 Other lineage4.1 None
ERR11466499 Other lineage4.3.4.1 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR1196546 Other lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR11972367 Sensitive lineage2.2.1 None
SRR13861332 Other lineage4.9 None
ERR970413 MDR-TB lineage2.2.1 None
ERR11465024 Other lineage4.1.1.3 None
ERR212125 HR-TB lineage4.9 None
ERR4813861 Other lineage4.3.3 None
ERR4819422 HR-TB lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR3275196 RR-TB lineage2.2.1 nl
ERR4819241 Other lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR245716 Sensitive lineage2.2.1 None
ERR3283028 Other La3;lineage4 None
ERR4769497 Other La1;lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR3743401 MDR-TB lineage2.2.1 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR13861510 Other lineage4.9 None
SAMN02585910 RR-TB lineage2.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR9119508 MDR-TB lineage4.6.4 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3797079 Sensitive lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR212033 Other lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6045217 Other lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR1035317 RR-TB lineage4.3.4.2 br
ERR2124083 HR-TB lineage4.6.1.2 None
ERR245758 Other lineage4.9.1 None
SRR26399973 Other La3;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
ERR12015086 RR-TB lineage4.8 None
SRR20969731 Other lineage2.2.1 None
SRR6832787 Other lineage2.2.1 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR3283044 Other lineage4 None
SRR1791696 RR-TB La1.8.1 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR9119669 MDR-TB lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR1184312 Other lineage2.2.1 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
ERR3797023 MDR-TB La1.8.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1169306 Other La3;lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3799304 RR-TB lineage6.1.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR926158 Sensitive lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR1181328 Other lineage2.2.1 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5917710 RR-TB lineage4.1.2.1 None
ERR1063862 HR-TB lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR7821123 Other lineage1.1.3.2 None
ERR926163 Other lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR3797070 Other lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR176779 HR-TB lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1172951 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9786421 Other lineage4.1.2.1 None
ERR1063858 HR-TB lineage4.9 None
SRR1196566 Other lineage4.9 None
ERR12015084 Other lineage4.8 None
SRR21732980 Other lineage4.3.3 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
SRR21690574 Other lineage4.1.2.1 None
ERR4816478 HR-TB lineage4 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR1172728 RR-TB La3 None
ERR3283014 Other La3;lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3804155 Other lineage4.1.2.1 None
SRR6044875 Other lineage4.9 None
ERR11049020 Other lineage4.8 None
SRR14066533 RR-TB lineage1.1.1 None
ERR926164 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9119500 MDR-TB lineage5.2 None
SRR1172234 Other lineage4.9 None
ERR473332 Other lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
SRR1165628 Other La3;lineage4.9 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR1165423 RR-TB lineage4.1.2.1 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR12416840 MDR-TB lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR9786711 Other lineage4.6.2.2 None
SRR6044835 Other lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
ERR3468607 RR-TB lineage4.9 None
SRR1915485 Other La1.2.BCG None
SRR1172817 Other La3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR9787165 Other lineage6.1.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR1034634 HR-TB lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR1915487 Other La1.2.BCG None
ERR9786645 Other lineage4.6.2.2 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR11662690 HR-TB lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341456 Other lineage4.9 None
ERR161037 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
DRR188519 Other lineage4.4.2 None
ERR108125 RR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR7496509 Other None
ERR9786671 Other None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
SRR1184372 MDR-TB None
SRR28044634 Other lineage3 None
ERR987722 MDR-TB None
SRR28119805 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4810624 MDR-TB lineage2.2 None
SRR1175127 Other lineage2.2.1.2 None
ERR4769421 Other La1.2 None
SRR3675507 RR-TB lineage4.9 None
ERR502908 HR-TB lineage2.2.1 None
ERR736817 HR-TB lineage4.3.4 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR2517514 Sensitive lineage4.8 None
SRR23961549 Other La1.2 None
SRR5341330 Other lineage4.9 None
SRR3675549 Other lineage4.9 None
ERR4769427 Other La1.2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173453 Other lineage4.4.1.1 None
ERR12015085 Other lineage4.8 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR3797083 RR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR3797015 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
ERR926156 Other lineage4.9 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2693228 RR-TB lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR13861146 RR-TB lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR1180226 HR-TB lineage4.9 None
ERR1213873 MDR-TB lineage4.3.4.2.1 rw
ERR4872102 MDR-TB lineage4.6.4 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR1181251 Other lineage2.2.1 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
SRR15368973 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR3675232 Other lineage4.1.2.1 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR7898221 MDR-TB lineage1.1.2 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR926160 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR2446566 Other lineage4.9 None
ERR4797285 MDR-TB lineage1.2.2.2 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR181744 HR-TB La3;lineage4.9 None
ERR9786443 Sensitive lineage4.8 None
SRR1165699 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4819877 HR-TB lineage4.9 None
ERR176751 HR-TB lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR3283042 HR-TB lineage4.9 None
SRR21690362 Other lineage1.1.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6785527 Sensitive lineage2.2.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR1180147 RR-TB lineage2.2.1.1 None
ERR9119502 MDR-TB lineage4.6.2.2 None
SRR1162864 MDR-TB lineage4.1.2.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR20969677 HR-TB La3;lineage2 None
ERR3797046 HR-TB lineage4.9 None
ERR11081258 Other lineage4.8 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR4769450 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR9787030 RR-TB lineage6.1.2 None
SRR3675311 Other lineage4.9 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR3283018 HR-TB lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926155 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR970445 MDR-TB lineage2.2.1 None
ERR9786617 Other lineage4.1.1.1 None
SRR1165584 Other lineage4.1.2.1 None
ERR4811493 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
SRR28351341 Other lineage4.1.1.1 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR234659 HR-TB None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR25827682 Other None
SRR1172857 Other None
ERR9786639 Sensitive lineage4.8 None
ERR3797029 Other lineage4.9 None
ERR9787197 Other None
ERR752229 Other lineage4.5 None
SRR1196583 Other lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
ERR11252664 Other lineage2.2.1 None
ERR9786843 Other None
SRR6789626 Other None
ERR11252736 Other lineage4.9 None
SRR7535086 Other None
ERR212001 HR-TB None
SRR28119777 Other lineage4.9 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR245675 Sensitive lineage1.1.2 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None