Rv3601c - c.93C>T
Drug resistance types
58 Sensitive
2 RR-TB
85 HR-TB
13 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
63 Other
lineage Counts
| lineage | Count |
|---|---|
| 103 | |
| lineage4 | 49 |
| lineage4;lineage3.1 | 1 |
| lineage2 | 2 |
| lineage4.9 | 24 |
| lineage3 | 2 |
| lineage4.5 | 2 |
| lineage4.6.2.2 | 2 |
| lineage2.2 | 7 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1 | 9 |
| La3 | 1 |
| lineage2.2.1.2 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.8 | 1 |
| lineage4.9;La3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.1 | 2 |
| lineage4.3 | 1 |
| lineage5.1.4 | 1 |
| La1.8.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 224 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3439432 | Other | None | ERR349296 | Sensitive | lineage4 | None | ERR3445504 | HR-TB | None | ERR400326 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797069 | Other | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR400345 | Other | lineage4 | None | ERR4024991 | Other | None | ERR405209 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR4407463 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4769450 | HR-TB | None | ERR4797313 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798406 | HR-TB | None | ERR4798099 | Other | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797474 | Other | None | ERR4800341 | Other | lineage3 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR6359045 | HR-TB | None | ERR4811030 | Sensitive | None | ERR4811105 | HR-TB | None | ERR5336148 | Other | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811142 | MDR-TB | None | ERR4811493 | HR-TB | None | ERR4812155 | Sensitive | None | ERR736867 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR751326 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736874 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1167384 | Other | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1169249 | Other | La3 | None | SRR1173384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1172728 | MDR-TB | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1173778 | Other | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1173629 | Other | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1184294 | HR-TB | None | SRR1183049 | Other | lineage2.2 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184388 | Other | None | SRR1184380 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196768 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR12142341 | HR-TB | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR15368973 | Other | None | SRR12416824 | HR-TB | None | SRR12882093 | Sensitive | lineage1.2.1.2 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR11081257 | Other | lineage4.8 | None | ERR176751 | HR-TB | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675465 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR158583 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675488 | HR-TB | None | SRR3675501 | HR-TB | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | SRR3675318 | Other | lineage4.9 | None | SRR3675221 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR3675236 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675311 | Other | None | ERR212001 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675572 | Other | None | SRR3675550 | Other | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212033 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818021 | Other | La1.8.1 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR1035162 | Other | None | ERR234659 | HR-TB | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341387 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341418 | Other | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341302 | HR-TB | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341313 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341333 | HR-TB | None | SRR5341330 | HR-TB | None | SRR5341467 | Other | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341456 | Other | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341469 | Other | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044790 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6045053 | Other | None | SRR6046046 | Other | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6046225 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | ERR4830353 | Other | None | SRR6046540 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502510 | Sensitive | lineage4 | None | ERR294266 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831638 | Sensitive | None | ERR502532 | HR-TB | None | ERR502943 | HR-TB | None | ERR502889 | Other | None | SRR8217918 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323043 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR067681 | HR-TB | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1035122 | Sensitive | None | ERR133986 | HR-TB | None | ERR1063896 | Sensitive | None | ERR3283021 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None |
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