Rv2477c - c.1521G>C


Drug resistance types
6 Sensitive 3 RR-TB 38 HR-TB 9 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 99 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 13
lineage4.9 42
lineage4.4.1.1 1
lineage2.1;lineage4.9;lineage6.3 7
La3;lineage2.1;lineage4.9;lineage6.3 4
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.1.1 1
lineage2.2 3
La1.7;lineage4.9 4
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.2.1 7
lineage4.1.2.1 1
La3;lineage2.1;lineage4.9 2
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;M.canetti;lineage4.9 2
lineage4.9;lineage6.3 3
12
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.8 1
lineage2.1 4
La1.7;lineage4.9;lineage7 3
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.1 1
lineage2.2.1.2;lineage7 1
La3 2
M.canetti;lineage2.1;lineage4.9 2
lineage2.2.1.2 1
La3;lineage2 1
M.canetti;lineage2.1;lineage6.3 1
La1.4 1
lineage4.5 1
lineage3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage6.3.1 1
La1.7.X-unk4;lineage4.9 1
La3;lineage4.9 1
lineage4.7 1
lineage2.1;lineage6.3 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.6.5 2
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4 2
La1.6;La3;lineage4.9 1
lineage3.1 1
lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.9.1 1
lineage4.6.2.2 1
La3;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.3 1
spoligotype Counts
spoligotype Count
None 158
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR4799513 HR-TB lineage2.2 None
SRR3675488 Other La1.7;lineage4.9 None
SRR1172951 Other lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR323037 Other lineage4.9 None
SRR1196566 Other lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4819781 Other lineage2.2.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR1172234 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR6359082 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR234659 HR-TB None
SRR1172857 Other None
ERR9787197 Other None
SRR3675236 Other None
SRR5341373 Other lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR4817735 Other lineage4.8 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045832 Other lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR702406 Other lineage2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR4596910 Sensitive lineage4.9 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR10808730 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR3416776 Other lineage2.1 None
SRR1172817 Other La3 None
SRR16278274 Other La1.4 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR1184381 MDR-TB None
ERR9786604 Other None
ERR4815604 Other None
SRR6789626 Other None
ERR4816999 Other None
ERR752229 Other lineage4.5 None
SRR1196583 Other lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR5341330 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1173355 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR3283055 HR-TB lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR20969708 HR-TB lineage2.2 None
ERR7801175 HR-TB lineage4.6.5 None
SRR20969731 Other lineage2.2.1 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR502912 Other lineage2.2.1 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
ERR3283032 Other lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4815471 HR-TB lineage4.9 None
ERR736831 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR6359069 HR-TB lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
ERR3797046 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR11662690 HR-TB lineage4.9 None
SRR6045053 Other lineage4 None
SRR1184372 MDR-TB None
SRR7535086 Other None
SRR1196768 MDR-TB None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR4819357 Sensitive lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1710057 Other lineage2.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR1169194 Other lineage4.9 None
ERR7801176 RR-TB lineage4.6.5 None
ERR4816466 HR-TB lineage4.9 None
SRR6046141 Other lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR1173218 Other lineage4.3.3 None