Rv0407 - c.504G>C


Drug resistance types
27 Sensitive 3 RR-TB 172 HR-TB 25 MDR-TB 14 Pre-XDR-TB 0 XDR-TB 109 Other
lineage Counts
lineage Count
174
lineage4.1.2 1
lineage4.3.4.2.1 2
lineage3.1 3
lineage4.1.2.1 14
lineage4 29
lineage4.9 33
lineage2.2 6
La1 2
La1.8.1 3
lineage4.1.3 2
lineage4.6.2.2 3
lineage3 6
lineage2 3
lineage1.2.2.2 1
lineage2.2.1 34
lineage4.6.1.1 1
lineage4.1.2.1.1 1
lineage1.1.2 1
lineage4.3.2 1
lineage1.1.3.2 1
lineage1.1.3.1 1
lineage5.2 2
lineage6.3.1 1
lineage2.2.2 1
lineage2.2.1.2 2
lineage4.4.1.1 1
lineage2.2.1.1 1
lineage4.5 2
lineage1.2.1.2.1 1
lineage4.3.3 1
lineage4.1.1 2
lineage4.3.2.1 2
lineage4.1 2
lineage4.3.4 1
lineage3;lineage2.1 1
lineage4.3 1
lineage4.8 2
lineage4.1.1.3 1
lineage4;lineage1.1.2 1
lineage4;lineage1.1 1
lineage4.1.1.2 1
lineage1.1 1
spoligotype Counts
spoligotype Count
None 350
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR323063 HR-TB None
SRR9970978 Sensitive lineage4.1.2 None
SRR7535086 Other None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323041 HR-TB None
ERR323043 HR-TB None
ERR323055 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR323108 HR-TB lineage4 None
ERR067681 HR-TB None
ERR067699 HR-TB lineage4 None
ERR1063883 Sensitive lineage4 None
ERR1035157 Other lineage4.9 None
ERR1063839 HR-TB lineage2.2 None
ERR1063857 HR-TB None
ERR1063858 HR-TB None
ERR1023525 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR1063859 HR-TB None
ERR108471 HR-TB lineage4 None
ERR3283010 Other La1 None
ERR133986 HR-TB None
ERR323115 Sensitive lineage4 None
ERR3283013 MDR-TB lineage4 None
ERR3283024 Other None
ERR3283017 HR-TB None
ERR3283025 HR-TB None
ERR3283027 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283032 HR-TB None
ERR3283040 HR-TB None
ERR3283036 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3283048 HR-TB lineage4.9 None
ERR3283058 Other lineage4.9 None
ERR3439432 Other None
ERR3445501 HR-TB None
ERR3283051 Other lineage4.9 None
ERR3468544 HR-TB None
ERR3797043 HR-TB None
ERR363506 Sensitive lineage4 None
ERR3797024 Other lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR3797016 HR-TB None
ERR3797015 HR-TB None
ERR3797014 Other None
ERR3797017 Other None
ERR3797069 Other None
ERR3797036 HR-TB None
ERR3797044 Other None
ERR3797058 Other lineage4.9 None
ERR3797061 Other None
ERR3797063 HR-TB None
ERR3804169 HR-TB lineage4.1.3 None
ERR3797082 Other lineage4.9 None
ERR3797080 HR-TB lineage4.9 None
ERR3797083 HR-TB None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR400529 Other lineage3 None
ERR387051 HR-TB None
ERR4769452 HR-TB None
ERR403298 HR-TB lineage4 None
ERR5336148 Other None
ERR4178226 Sensitive lineage4 None
ERR4407463 HR-TB None
ERR473332 Other lineage4 None
ERR4769442 HR-TB lineage4 None
ERR4188350 HR-TB None
ERR4769450 HR-TB None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4796929 Sensitive lineage4 None
ERR4799025 Pre-XDR-TB None
ERR4798406 HR-TB None
ERR4797201 Other lineage1.2.2.2 None
ERR4798262 HR-TB La1 None
ERR4810741 HR-TB None
ERR4810473 Pre-XDR-TB lineage2.2.1 cn
ERR4810483 MDR-TB lineage2.2.1 cn
ERR4799513 HR-TB lineage2.2 None
ERR4800341 Other lineage3 None
ERR4811303 MDR-TB lineage2.2.1 cn
ERR4810790 Pre-XDR-TB lineage2.2.1 cn
ERR4811022 HR-TB None
ERR4810972 Pre-XDR-TB lineage2.2.1 cn
ERR4810997 Pre-XDR-TB lineage2.2.1 cn
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR4811363 Pre-XDR-TB lineage2.2.1 None
ERR4811322 Pre-XDR-TB lineage2.2.1 cn
ERR4811312 MDR-TB lineage2.2.1 cn
ERR4811367 MDR-TB lineage2.2.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR5917710 Other lineage4.1.2.1 None
ERR6866547 Sensitive lineage4 None
ERR6358837 HR-TB None
ERR6358979 Other None
ERR6359045 HR-TB None
ERR6865502 Sensitive lineage4 None
ERR736835 HR-TB None
ERR6866807 HR-TB lineage4 None
ERR702406 HR-TB None
ERR736837 Other lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
ERR772255 MDR-TB lineage4.3.2 None
ERR7821123 Other lineage1.1.3.2 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR8976043 HR-TB None
ERR9117709 HR-TB None
ERR9119500 MDR-TB lineage5.2 None
ERR9786694 Other lineage4.1.2.1 None
ERR9634265 Sensitive None
ERR9786604 Other None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9787197 Other None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9787139 Other lineage6.3.1 None
SRR069989 HR-TB lineage2 None
SRR069978 Pre-XDR-TB lineage2.2.2 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
SRR1162740 Other lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1172234 Other None
SRR1167384 Other lineage4 None
SRR1169194 Other None
SRR1172728 MDR-TB None
SRR1172817 HR-TB None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1173118 Other None
SRR1172857 MDR-TB None
SRR1172951 Other None
SRR1173153 HR-TB None
SRR1173633 HR-TB lineage4.9 None
SRR1173400 Other None
SRR1173453 Other lineage4.4.1.1 None
SRR1184381 MDR-TB None
SRR1173629 Other None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1180270 Other lineage2.2.1 None
SRR1184294 HR-TB None
SRR1173778 Other None
SRR1173788 Other None
SRR1180172 Other lineage2.2.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184372 MDR-TB None
SRR1196494 MDR-TB None
SRR1184388 Other None
SRR1196474 HR-TB lineage3.1 None
SRR1184380 HR-TB None
SRR1196546 HR-TB None
SRR1196768 MDR-TB None
SRR1196566 HR-TB None
SRR12416824 HR-TB None
SRR12142341 HR-TB None
SRR12416840 MDR-TB lineage4.9 None
SRR13861413 Sensitive lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR13837677 Sensitive lineage4.9 None
SRR13861386 HR-TB lineage4.9 None
SRR13861397 HR-TB lineage4.9 None
SRR13861151 RR-TB lineage4.9 None
SRR13861424 RR-TB lineage4.9 None
SRR17787489 MDR-TB lineage2.2.1 None
SRR13861528 HR-TB lineage4.9 None
SRR13861663 Sensitive lineage4.9 None
SRR1640750 HR-TB None
SRR14782405 HR-TB None
SRR1510066 Other lineage1.2.1.2.1 None
SRR15368973 Other None
SRR17787491 MDR-TB lineage2.2.1 None
SRR18002906 Pre-XDR-TB lineage2.2.1 None
SRR1791696 Other La1.8.1 None
SRR18548991 MDR-TB lineage2.2.1 None
SRR18054798 Pre-XDR-TB lineage2.2.1 None
SRR18213713 HR-TB lineage4.5 None
SRR20969708 HR-TB lineage2.2 None
SRR18910194 HR-TB lineage2.2 None
SRR20969677 HR-TB lineage2 None
SRR19276626 HR-TB lineage4.3.3 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR20969731 Other lineage2.2.1 None
ERR176793 Other lineage4.1.1 None
SRR2101360 MDR-TB lineage4.1.2.1 None
SRR21887763 Pre-XDR-TB lineage2.2.1 None
ERR176778 HR-TB None
SRR20970016 Other lineage2.2 None
SRR2101463 Sensitive lineage4.3.2.1 None
ERR4815604 HR-TB None
SRR3675464 HR-TB lineage4.1 None
SRR3675465 HR-TB None
SRR6325445 HR-TB None
ERR1035239 HR-TB None
ERR158583 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675482 HR-TB None
SRR3675486 HR-TB None
ERR161033 HR-TB None
ERR161039 Sensitive lineage4.3.4 None
SRR3675488 HR-TB None
SRR3675221 HR-TB None
ERR181744 HR-TB None
SRR3675501 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675236 HR-TB None
SRR3675222 Other None
SRR3675234 Other None
ERR181824 HR-TB lineage4 None
ERR176549 Other lineage4.3.4.2.1 None
SRR3675270 HR-TB None
SRR3675280 HR-TB lineage4.9 None
ERR176568 Other lineage4.3 None
ERR176643 HR-TB None
SRR3675284 HR-TB lineage4.9 None
SRR3675311 Other None
ERR176751 HR-TB None
ERR176651 HR-TB None
SRR3675456 HR-TB None
SRR3675503 Sensitive lineage4.9 None
ERR2027263 Other lineage4 None
ERR3275220 Other lineage3 nl
ERR4816999 Other None
ERR212034 HR-TB None
ERR4816151 Other lineage4.8 None
ERR212001 HR-TB None
SRR3675550 Other None
ERR212033 HR-TB None
SRR3675545 HR-TB None
SRR3675574 HR-TB None
SRR3675555 HR-TB None
SRR3675558 HR-TB None
ERR212123 Other None
ERR212121 HR-TB None
ERR212138 HR-TB lineage4 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816466 HR-TB None
ERR4816550 Sensitive lineage4.9 None
SRR3742665 HR-TB None
ERR4810931 MDR-TB lineage2.2.1 cn
ERR4816585 Other lineage2.2 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4816656 HR-TB None
ERR2229143 Other lineage4.1.1 None
ERR2446566 Other lineage4.1 None
ERR4818021 Other La1.8.1 None
ERR1035162 Other None
ERR234659 HR-TB None
ERR4819322 Other lineage4;lineage1.1 None
ERR4818536 Other lineage4.9 None
ERR4818607 Sensitive lineage4.9 None
ERR4818252 Other lineage4.1.1.2 None
ERR4818929 HR-TB None
ERR2509673 Other lineage2.2.1 None
ERR2446144 Other lineage3 nl
SRR5341418 Other None
ERR4819462 Other lineage4 None
ERR2514327 HR-TB lineage4.8 None
ERR4819781 Other lineage2.2.1 None
SAMN02414850 Other lineage4.1.2.1 None
SRR5341333 HR-TB None
ERR2514692 Other None
SRR5341302 HR-TB None
ERR2693257 Other None
ERR6359082 Other lineage4.9 None
ERR2693254 Other None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2693231 Other None
ERR2517528 Other lineage3 nl
ERR4821053 Other lineage3 None
ERR2693239 HR-TB None
ERR2693230 Other None
SRR6045526 HR-TB None
SRR6045503 HR-TB None
SRR6045519 HR-TB None
SRR5535933 HR-TB None
ERR2693227 Other lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR278594 HR-TB None
SRR5709967 MDR-TB lineage2.2.1 None
SRR6045555 HR-TB None
SRR6046141 Other lineage4.9 None
ERR2693232 Other lineage4.9 None
SRR6045892 Sensitive None
SRR6046133 HR-TB None
SRR6044890 Other lineage4.9 None
SRR6044790 HR-TB None
SRR6044876 Sensitive lineage4 None
SRR6044875 HR-TB lineage4.9 None
SRR6045952 HR-TB None
SRR6046046 Other None
SRR6045053 Other None
SRR6045233 HR-TB None
SRR6045217 Other lineage4 None
SRR6325444 HR-TB None
SRR6046225 HR-TB None
SRR6046210 Other lineage4 None
SRR6046066 HR-TB None
SRR6045327 HR-TB None
ERR3275196 Other lineage2.2.1 nl
ERR2446563 Other lineage2.2.1 nl
SRR6046362 HR-TB None
SRR6046382 HR-TB lineage2.2.1 None
SRR6046397 Other None
SRR6325448 HR-TB None
ERR4830353 Other None
SRR6046460 HR-TB None
SRR6046482 HR-TB None
SRR6046514 HR-TB None
SRR6046644 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6046540 HR-TB None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6325447 HR-TB None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6046824 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6046802 Other lineage4 None
SRR6896222 Sensitive lineage4.3.2.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6325442 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
ERR3077978 Other lineage1.1 None
ERR323034 HR-TB lineage3.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR294248 HR-TB None
SRR6789626 Other None
SRR6824363 RR-TB lineage2.2.1 cn
ERR323036 HR-TB None
ERR5311081 HR-TB None
ERR502532 HR-TB None
ERR502889 Other None
ERR5311099 HR-TB None
SRR8217918 HR-TB None
ERR323038 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
ERR5311090 HR-TB None
SRR7496517 Other None