Rv0006 - c.231T>C


Drug resistance types
68 Sensitive 3 RR-TB 143 HR-TB 21 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 118 Other
lineage Counts
lineage Count
131
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4 15
lineage2.2.1 18
lineage2.1 3
lineage3;lineage2.1 1
lineage1.2.1.1 1
lineage4.9 51
lineage4.8 3
lineage4.4.1.1 3
lineage4.1.1.3 2
lineage2.2 4
lineage4;lineage1.1.2 1
lineage1.2.2.2 39
La1.8.1 3
lineage3.1.3 1
lineage4.1 3
lineage4.1.2 1
lineage4.1.1 1
lineage4.2.1 1
lineage3 8
lineage4;lineage1.1 1
lineage4.1.2.1 19
lineage4.7 2
lineage4.1.1.3;lineage1.2.2.2 2
lineage3.1 2
lineage1.1 1
lineage5.2 2
lineage4.6.2.2 3
lineage4.2.1.1 1
La2 1
lineage4.4.2 1
lineage4.6.1.1 4
La1 1
lineage4.1.3 2
La1.2 1
lineage3.1.2 1
lineage4.3.3 2
lineage4.1.2.1.1 1
lineage4.3.2 2
lineage1.1.3.1 1
lineage1.1.2 1
lineage6 1
lineage6.3.1 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage2.2.1.2 2
lineage2.2.1.1 1
lineage4.9;lineage2.2 1
lineage4.4.1.1.1 1
lineage2 2
lineage1.2.1.2 1
lineage4.5 1
lineage1 1
lineage4.9;lineage4.6.3 1
spoligotype Counts
spoligotype Count
None 356
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675482 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR4814639 HR-TB lineage4 None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675486 HR-TB None
ERR161033 HR-TB None
SRR3416776 Other lineage2.1 None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675221 HR-TB None
SRR3675270 HR-TB None
ERR4814734 Other lineage1.2.1.1 None
SRR3675236 HR-TB None
SRR3675284 HR-TB lineage4.9 None
SRR3675280 HR-TB lineage4.9 None
ERR176740 HR-TB None
SRR3675312 HR-TB lineage4 None
SRR3675383 HR-TB None
SRR3675311 Other None
ERR4815752 Other lineage4.9 None
SRR3675456 HR-TB None
ERR4816999 Other None
SRR3675510 Other None
SRR3675545 HR-TB None
ERR4816151 Other lineage4.8 None
SRR3675550 Other None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3675558 HR-TB None
ERR212121 HR-TB None
ERR4816466 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR5341422 HR-TB lineage2.1 None
SRR3675555 HR-TB None
SRR3675572 Other None
ERR4817896 HR-TB lineage2.2.1 None
ERR4816585 Other lineage2.2 None
ERR4816656 HR-TB None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
SRR7496472 Other None
ERR3275272 Sensitive lineage1.2.2.2 nl
ERR4818021 Other La1.8.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR2446566 Other lineage4.1 None
ERR1035162 Other None
ERR3275196 Other lineage2.2.1 nl
ERR234659 HR-TB None
ERR4818347 Other lineage4.1.2 None
ERR2229143 Other lineage4.1.1 None
ERR3275348 Sensitive lineage1.2.2.2 nl
ERR2509673 Other lineage2.2.1 None
ERR4818929 HR-TB None
SRR5007188 Other lineage4 None
ERR2512770 Other lineage4.2.1 None
ERR4818615 Other None
ERR4817537 Sensitive lineage3 None
SRR5341400 HR-TB lineage4 None
SRR5341373 HR-TB lineage4 None
SRR5341456 Other None
ERR2514327 HR-TB lineage4.8 None
ERR4819322 Other lineage4;lineage1.1 None
SRR5341408 Sensitive lineage3 None
ERR4820335 Other lineage4.1.2.1 None
SRR5341418 Other None
ERR1035138 MDR-TB None
SRR5341432 HR-TB lineage4 None
ERR6359082 Other lineage4.9 None
SRR5341293 HR-TB lineage4 None
ERR4819932 Other lineage4.7 None
SRR5341315 Sensitive None
ERR4819781 Other lineage2.2.1 None
ERR4819933 Other lineage4.9 None
SRR5341313 HR-TB None
SRR5341333 HR-TB None
ERR4820854 Other lineage4.1.2.1 None
SRR2100270 HR-TB lineage4.1.1.3;lineage1.2.2.2 None
SRR2100301 MDR-TB lineage1.2.2.2 None
ERR4821053 Other lineage3 None
ERR2446563 Other lineage2.2.1 nl
SRR5341470 HR-TB None
ERR2693254 Other None
ERR2693239 HR-TB None
ERR2693227 Other lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR4821884 Sensitive lineage1.2.2.2 None
SRR5535933 HR-TB None
SRR6045519 HR-TB None
ERR278594 HR-TB None
SRR6045002 MDR-TB lineage4.9 None
SRR6046133 HR-TB None
SRR6044838 Other lineage4.9 None
SRR6044855 Other lineage4.9 None
SRR6045952 HR-TB None
ERR2446412 Sensitive lineage1.2.2.2 nl
SRR6045555 HR-TB None
SRR6045892 Sensitive None
SRR6045217 Other lineage4 None
SRR6045053 Other None
SRR6046305 Other lineage4.9 None
SRR6046066 HR-TB None
SRR6045399 Other None
SRR6046046 Other None
SRR6325444 HR-TB None
SRR6046299 HR-TB None
SRR6046385 Other lineage4.9 None
SRR6046382 HR-TB lineage2.2.1 None
ERR2517195 Sensitive lineage1.2.2.2 nl
SRR6046482 HR-TB None
ERR2517185 Sensitive lineage1.2.2.2 nl
SRR6046514 HR-TB None
SRR6325448 HR-TB None
SRR6046540 HR-TB None
SRR6046521 Other lineage4.4.1.1 None
SRR6325447 HR-TB None
SRR6046611 HR-TB lineage4.9 None
SRR6046594 HR-TB lineage4 None
SRR6650244 Sensitive lineage1.2.2.2 None
SRR6442524 Other lineage1.2.2.2 None
SRR6046824 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4798708 Sensitive lineage1.2.2.2 in
ERR4800314 Sensitive lineage1.2.2.2 in
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6325442 HR-TB None
ERR4799618 Other lineage1.2.2.2 in
ERR323034 HR-TB lineage3.1 None
ERR3077978 Other lineage1.1 None
ERR294248 HR-TB None
ERR4872094 MDR-TB lineage5.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR2503478 Sensitive lineage1.2.2.2 fi
ERR4816700 Sensitive lineage1.2.2.2 gb
SRR6832178 HR-TB lineage4.2.1.1 None
SRR6785267 Other lineage2.2.1 None
SRR6797620 Other lineage1.2.2.2 None
SRR6789624 MDR-TB lineage4.1 None
SRR6981961 Sensitive lineage2.2.1 None
ERR323036 HR-TB None
ERR502532 HR-TB None
ERR502524 HR-TB La2 None
ERR502889 Other None
ERR5311081 HR-TB None
ERR5311099 HR-TB None
ERR323038 HR-TB None
ERR5311090 HR-TB None
SRR7496509 Other None
ERR323043 HR-TB None
SRR7496517 Other None
SRR7496523 Other lineage4.7 None
SRR7535086 Other None
ERR323039 HR-TB None
ERR323041 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323055 HR-TB None
ERR323053 HR-TB None
DRR188519 Other lineage4.4.2 None
ERR323063 HR-TB None
DRR189011 Sensitive lineage1.2.2.2 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR067699 HR-TB lineage4 None
ERR067681 HR-TB None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR1034652 Other None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1034634 HR-TB None
ERR1035157 Other lineage4.9 None
ERR114452 MDR-TB lineage1.2.2.2 None
ERR117710 HR-TB lineage4.1.1.3;lineage1.2.2.2 None
ERR4821801 Sensitive lineage1.2.2.2 gb
ERR1199132 Sensitive lineage4.6.1.1 None
ERR133825 Sensitive lineage4 None
ERR3283027 HR-TB None
ERR3283017 HR-TB None
ERR133986 HR-TB None
ERR3283010 Other La1 None
ERR3283013 MDR-TB lineage4 None
ERR3283051 Other lineage4.9 None
ERR3283036 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3445504 HR-TB None
ERR3439432 Other None
ERR3797058 Other lineage4.9 None
ERR3468544 HR-TB None
ERR3797016 HR-TB None
ERR5336148 Other None
ERR3797023 HR-TB La1.8.1 None
ERR3797036 HR-TB None
ERR3797069 Other None
ERR3804155 Other lineage4.1.2.1 None
ERR3797082 Other lineage4.9 None
ERR3797083 HR-TB None
ERR3804169 HR-TB lineage4.1.3 None
ERR4797201 Other lineage1.2.2.2 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769457 Other lineage4.9 None
ERR4769450 HR-TB None
ERR387051 HR-TB None
ERR403298 HR-TB lineage4 None
ERR4188350 HR-TB None
ERR4769452 HR-TB None
ERR4769497 HR-TB La1.2 None
ERR2514247 Other lineage1.2.2.2 gb
ERR4798504 Other lineage3 None
ERR4797588 MDR-TB lineage3 None
ERR4798406 HR-TB None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4799025 Pre-XDR-TB None
ERR4798648 HR-TB lineage3.1.2 None
ERR4800341 Other lineage3 None
ERR4810741 HR-TB None
ERR4800527 MDR-TB lineage2.2.1 None
ERR5908228 Other lineage4.3.3 None
ERR4811022 HR-TB None
ERR6866410 Sensitive None
ERR6358755 Other lineage4.6.1.1 None
ERR6358837 HR-TB None
ERR6358991 HR-TB None
ERR702406 HR-TB None
ERR702404 HR-TB None
ERR736837 Other lineage4.9 None
ERR736867 HR-TB None
ERR736865 HR-TB None
ERR736835 HR-TB None
SRR22251804 HR-TB lineage1.2.2.2 None
SRR22249590 Other lineage1.2.2.2 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR7821163 Other lineage2.2.1 None
ERR9117709 HR-TB None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR8976043 HR-TB None
ERR9119500 MDR-TB lineage5.2 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9117805 Other lineage4.3.2 None
ERR9119096 Other lineage4.3.3 None
ERR9786421 Other lineage4.1.2.1 None
ERR9125590 Sensitive lineage1.2.2.2 None
ERR9634265 Sensitive None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9786671 Other None
ERR9786604 Other None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786569 Other lineage4.8 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9786843 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR990545 Other lineage3 None
ERR9787197 Other None
ERR987722 HR-TB None
ERR987733 RR-TB lineage4.6.1.1 None
ERR9787165 Other lineage6 None
ERR9787139 Other lineage6.3.1 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1172214 HR-TB lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
SRR1172310 HR-TB None
SRR1173118 Other None
SRR1172728 MDR-TB None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1173778 Other None
SRR1173384 Other lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1173788 Other None
SRR1175512 Sensitive lineage4.9 None
SRR1174897 HR-TB None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1180312 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180319 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1181237 Sensitive lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1184372 MDR-TB None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181325 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR1196677 HR-TB lineage2 None
SRR12006550 Other lineage1.2.1.2 None
SRR12882037 Sensitive lineage1.2.2.2 None
SRR12416824 HR-TB None
SRR12882025 Sensitive lineage1.2.2.2 None
SRR13861251 RR-TB lineage4.9 None
SRR12882725 Sensitive lineage1.2.2.2 None
SRR13837514 Sensitive lineage4.9 None
SRR12882036 Sensitive lineage1.2.2.2 None
SRR12882039 Sensitive lineage1.2.2.2 None
SRR12882721 Sensitive lineage1.2.2.2 None
SRR12882731 Sensitive lineage1.2.2.2 None
SRR13837990 Sensitive lineage4.9 None
SRR13861449 Other lineage4.9 None
SRR13861396 HR-TB lineage4.9 None
SRR13861332 Other lineage4.9 None
SRR13861413 Sensitive lineage4.9 None
SRR14782405 HR-TB None
SRR13861484 RR-TB lineage4.9 None
SRR13861568 Other lineage4.9 None
SRR13861720 Other lineage4.9 None
SRR13861663 Sensitive lineage4.9 None
SRR14514372 Sensitive lineage1.2.2.2 None
SRR15368973 Other None
SRR1640750 HR-TB None
SRR16057988 Sensitive lineage1.2.2.2 None
SRR18913787 Sensitive lineage1.2.2.2 None
SRR17832802 HR-TB lineage3 None
SRR18003019 Other lineage2.2.1 None
SRR1710057 Other lineage2.1 None
SRR1791696 Other La1.8.1 None
SRR18149510 Sensitive lineage1.2.2.2 None
SRR18213713 HR-TB lineage4.5 None
SRR19303884 HR-TB None
SRR19324981 Sensitive lineage1.2.2.2 None
SRR19304036 HR-TB None
SRR20969677 HR-TB lineage2 None
SRR19576437 Sensitive lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR20970016 Other lineage2.2 None
SRR21735256 Other lineage1 None
SRR25827434 Sensitive lineage1.2.2.2 None
SRR3675464 HR-TB lineage4.1 None
SRR8692887 Other None
SRR6797476 Other lineage1.2.2.2 None
SRR3675502 Other None
SRR26399239 Sensitive lineage4.9 None
SRR22251380 Sensitive lineage1.2.2.2 None
SRR26112545 Sensitive lineage1.2.2.2 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
ERR4815604 HR-TB None
SRR6325445 HR-TB None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR3675465 HR-TB None
ERR158583 HR-TB None
ERR1035239 HR-TB None