Rv3457c - c.534G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
65 Sensitive
3 RR-TB
27 HR-TB
8 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
49 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 93 |
| lineage4.1.2.1 | 9 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1 | 10 |
| lineage4.1.2 | 1 |
| lineage4.3.3 | 1 |
| lineage2.2.1.2 | 3 |
| lineage4.9;lineage7 | 1 |
| lineage2.2 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.7 | 1 |
| lineage4.1;lineage4.9 | 1 |
| La1.8.1 | 1 |
| lineage4 | 6 |
| lineage3 | 5 |
| lineage4.3.2.1 | 1 |
| lineage4.5 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.8 | 3 |
| M.canetti;lineage4.9 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage2.2.2 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.6.1.2 | 1 |
| La1;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| 2 | |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 156 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR363506 | Sensitive | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR9786523 | Sensitive | lineage4.1.2.1 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR6046593 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR3675441 | Other | lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR6046878 | Other | lineage4.9 | None | SRR30182471 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | SRR7240476 | Other | La1.8.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR5535933 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR13264981 | Sensitive | La1.7;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR349298 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR323037 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR363502 | Other | lineage4.9 | None | SRR6046594 | Sensitive | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4796577 | HR-TB | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4815079 | RR-TB | lineage3 | None | ERR369151 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | None | SRR3675265 | Other | lineage4 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046046 | Other | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None |
|---|
