Rv0667 - c.1524G>C
Drug resistance types
49 Sensitive
5 RR-TB
47 HR-TB
18 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
165 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 109 |
| lineage2.2.1.2 | 2 |
| lineage4.9;lineage6.3 | 8 |
| lineage2.1;lineage4.9 | 15 |
| La3;lineage2 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| 25 | |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage4.8 | 4 |
| lineage2.2.1 | 17 |
| lineage3 | 4 |
| lineage1.1.2;lineage4.1.3 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage6.1.3 | 2 |
| lineage2.2.1;lineage3 | 1 |
| lineage3.1.1 | 1 |
| lineage4.1.2.1 | 11 |
| lineage4 | 5 |
| lineage4.3.2 | 1 |
| lineage1.2.2.2 | 1 |
| La3 | 2 |
| lineage4.8.1 | 1 |
| lineage1.1.3.2 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 8 |
| lineage2.1 | 5 |
| lineage4.1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.5 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;lineage4.8 | 2 |
| lineage4.3.3 | 3 |
| lineage6.3.1 | 1 |
| lineage1.1.2 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.7 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La3;lineage1.1.2 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.4.1.1 | 2 |
| lineage4.1.1.1 | 3 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | 1 |
| La3;lineage2.2.1 | 2 |
| La1.7;lineage4.2 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.6.2.2 | 2 |
| La1.2.BCG;La1.8.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.4.1.1.1 | 1 |
| La3;lineage4.9 | 3 |
| lineage2.2.1;lineage4 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.3 | 2 |
| lineage5.2 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 294 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1175074 | Other | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SRR1169194 | Other | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4822101 | Sensitive | lineage1.1.2;lineage4.1.3 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR5341425 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR4816999 | Other | None | ERR124636 | Sensitive | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR3675248 | Other | lineage4.9 | None | SRR1196474 | Other | lineage3.1.1 | None | SRR1196546 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR3283044 | Other | lineage4 | None | SRR1165699 | Other | lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR3675549 | Other | lineage4.9 | None | SRR1172817 | Other | La3 | None | SRR1173400 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | SRR28868888 | Other | lineage1.1.3.2 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | SRR1173118 | Other | lineage2.2.1 | None | SRR28351339 | MDR-TB | lineage4 | None | SRR1172857 | Other | None | SRR28119805 | Other | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786440 | Other | lineage4.1 | None | SRR1173363 | Other | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR29096203 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR4818615 | Sensitive | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR29050928 | Other | lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR752229 | Other | lineage4.5 | None | SRR1196583 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675275 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR18213713 | HR-TB | None | ERR4817893 | Other | La3;lineage4.8 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3416776 | Other | lineage2.1 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1196677 | Other | lineage2.2 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR5341300 | HR-TB | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4815604 | Other | None | ERR1035157 | Other | lineage4.9 | None | SRR6046066 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR26159043 | Other | lineage4.9 | None | SRR29051077 | Other | lineage4.9 | None | SRR6789626 | Other | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR9786515 | Other | lineage4.1.2.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR3675236 | Other | None | ERR7821123 | Other | lineage1.1.3.2 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4800341 | Other | lineage3 | None | ERR4769493 | Other | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR4816100 | Sensitive | lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | None | ERR702406 | Other | lineage2.1 | None | ERR9117709 | Other | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3675246 | Other | lineage4.9 | None | SRR7496509 | Other | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR2229542 | Other | lineage4.8 | None | SRR5341467 | Other | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR7496472 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR502912 | Other | lineage2.2.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1184381 | MDR-TB | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR2514692 | Other | None | SRR5341387 | Other | lineage4.9 | None | SRR25827682 | Other | None | ERR9787197 | Other | None | SRR6789621 | Other | lineage4.9 | None | ERR4817060 | Other | None | ERR234659 | Other | None | ERR4818536 | Other | lineage4.9 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR9786604 | Other | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR29096541 | Other | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR4407463 | HR-TB | None | SRR1173778 | Other | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR29016780 | Other | lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR1063896 | Sensitive | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1710057 | Other | lineage2.1 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | SRR3675214 | Other | lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR1173355 | Other | lineage4.9 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR7496517 | Other | None | ERR13267017 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR176741 | Other | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR29016901 | Other | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6785263 | Sensitive | lineage2.2.1 | None | ERR751326 | Other | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR11049020 | Other | lineage4.8 | None | SRR5341453 | Other | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR12015083 | Other | La3;lineage4.8 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR29017461 | Other | La3;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR3675311 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR28119752 | Other | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | ERR4815752 | Other | lineage4.9 | None | SRR3675572 | Other | None | SRR3675457 | Other | lineage4.9 | None | SRR1196566 | Other | lineage4.9 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6.1.3 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1196768 | MDR-TB | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786569 | Other | lineage4.8 | None | ERR137286 | Other | lineage4.9 | None |
|---|
