Rv0668 - c.3216T>C
Drug resistance types
49 Sensitive
9 RR-TB
59 HR-TB
20 MDR-TB
4 Pre-XDR-TB
1 XDR-TB
85 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 82 |
| La1.7;lineage4.9 | 9 |
| lineage4.6.2.2 | 3 |
| lineage3 | 6 |
| lineage4.9;lineage7 | 5 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 5 |
| La3;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.7 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.2.1 | 11 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4 | 4 |
| lineage2.2 | 4 |
| lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage4.9 | 5 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| lineage6.1.3 | 3 |
| La3;lineage4.3.4 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage2.2.1.1 | 4 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage6.1.1 | 2 |
| lineage4.1.2.1 | 2 |
| 1 | |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.2;lineage4.9 | 3 |
| lineage3.1;lineage9 | 1 |
| lineage4.5 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La2;lineage2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La2;lineage4.9 | 2 |
| La1.6;La3;lineage4.9 | 2 |
| lineage4.8 | 3 |
| lineage3.1.2.2 | 1 |
| lineage4.9;lineage9 | 3 |
| M.canetti;lineage1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.4.2 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.3.4.1 | 3 |
| La1;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.3.4 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.7;lineage4.3.4.1 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La1.2.BCG | 1 |
| lineage4.6.3;lineage4.9 | 2 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 227 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR176778 | HR-TB | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046878 | Other | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR3675222 | Other | La1.7 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SAMN02585910 | Other | lineage2.2.1 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR3803821 | Other | lineage6.1.3 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR29096150 | Other | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341453 | Other | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR3675441 | Other | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR176751 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR373947 | Other | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR987722 | MDR-TB | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | ERR3283042 | Other | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR9787076 | Other | lineage6.1.3 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR752229 | Other | lineage4.5 | None | SRR29097026 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR387051 | Other | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR3675265 | Other | lineage4 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR3675284 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR15014682 | MDR-TB | lineage4.8 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR161037 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR926164 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR4769452 | Other | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR29097066 | Sensitive | lineage4.9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR29096410 | Other | lineage4.9 | None | ERR400529 | Other | lineage3 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR3675270 | Other | lineage4.9 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR3675582 | Other | lineage4.9 | None | ERR11465801 | Other | lineage4.3.4.1 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None |
|---|
