lineage | Count |
---|---|
lineage1.2.1.1 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage2.1 | 1 |
lineage4 | 53 |
lineage1.1 | 1 |
42 | |
lineage4.5 | 2 |
lineage4.1 | 2 |
lineage4.1.1.2 | 1 |
lineage4.3.4.2.1 | 4 |
lineage4.9 | 12 |
lineage3 | 2 |
lineage4.6.2.2 | 1 |
lineage1.1.2 | 2 |
lineage2.2.1 | 11 |
lineage4.9;lineage2.1 | 1 |
lineage4.1.2 | 2 |
lineage2.2.1.1 | 1 |
lineage4.8 | 1 |
lineage4.3.2.1 | 1 |
lineage4.1.2.1 | 2 |
lineage4.3.4.1 | 1 |
lineage2.2 | 3 |
La1.8.1 | 2 |
lineage4;lineage3.1 | 1 |
La1.2 | 1 |
lineage6 | 1 |
lineage1.1.3.1 | 1 |
lineage4.6.1.2 | 1 |
lineage6.1.3 | 1 |
lineage2.2.1.2 | 2 |
lineage1.2.1.2 | 1 |
lineage4.2.1 | 1 |
La1.7.1 | 1 |
lineage7;lineage2.2.1.2 | 1 |
spoligotype | Count |
---|---|
None | 162 |
ID | Drug resistance | Lineage | Country iso2 | ERR4814734 | Other | lineage1.2.1.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4818962 | Sensitive | lineage1.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR3675270 | HR-TB | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341313 | HR-TB | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341315 | Sensitive | None | SRR5341456 | Other | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5535933 | HR-TB | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045519 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046046 | Other | None | SRR6046492 | Other | None | SRR6046299 | HR-TB | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831117 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR11465015 | Sensitive | lineage4.3.4.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR1034634 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063896 | Sensitive | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR133825 | Sensitive | lineage4 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283021 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR4024991 | Other | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR405209 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769521 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR6358979 | Other | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866022 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR9787030 | Sensitive | lineage6 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR752229 | Other | lineage4.5 | None | ERR9119669 | HR-TB | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR10808805 | Sensitive | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR17658565 | Other | lineage3 | None | SRR14801749 | Sensitive | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None |
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