Rv3596c - c.1788C>T


Drug resistance types
134 Sensitive 7 RR-TB 107 HR-TB 18 MDR-TB 11 Pre-XDR-TB 0 XDR-TB 112 Other
lineage Counts
lineage Count
77
lineage4.1.2.1 6
lineage4.8 10
lineage3 9
lineage6.1.3 1
lineage6 1
lineage2.2.1 28
lineage4 99
lineage4.4.1.1.1 2
La3 1
lineage4.9 82
lineage2.2.1.2 2
lineage2.2.1.1 4
lineage2.2 7
lineage4.9;lineage2.2 1
lineage2 1
lineage1.2.1.2 1
lineage4.2.1 3
lineage7;lineage2.2.1.2 1
La1.8.1 4
La1.7.1 1
lineage3.1.3 2
lineage4;lineage2.2 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage1.2.1.1 1
lineage2.1 1
lineage4.4.1 1
lineage4.1.2 3
lineage4.3 1
lineage3.1.2.1 1
lineage4;lineage2 1
lineage4.5 3
lineage1.1.2 3
lineage4.1 2
lineage4.3.4.2.1 1
lineage4.1.1.2 1
lineage1.1.1 1
lineage4.6.2.2 1
lineage4.9;lineage2.1 1
lineage4.1.1 1
lineage4.4.1.1 1
lineage4.7 1
lineage4.3.3 1
lineage4.8.1 1
lineage4.3.2.1 1
lineage4.4.2 1
lineage4.3.2 1
La1 2
lineage4;lineage3.1 1
La1.3 5
lineage4.9;La1.3 2
La1.2 2
lineage4.3.4 1
lineage1.1.3.1 1
spoligotype Counts
spoligotype Count
None 389
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9119669 HR-TB None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9786619 Sensitive lineage4.8 None
ERR9786076 Sensitive lineage3 None
ERR9786444 Sensitive lineage4.8 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9896144 Other lineage3 None
ERR9787256 Other lineage6.1.3 None
ERR9787336 Other lineage6 None
SRR1049674 HR-TB lineage2.2.1 None
SRR10315551 Sensitive lineage2.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1049675 HR-TB lineage2.2.1 None
SRR10808399 Sensitive lineage4 None
SRR1062928 RR-TB lineage4 None
SRR1062919 HR-TB lineage2.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
SRR10808668 Sensitive lineage2.2.1 None
SRR1158918 Sensitive lineage4 None
SRR1167384 Other lineage4 None
SRR1169249 Other La3 None
SRR1172717 Other lineage4.9 None
SRR1169306 Other None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1172807 Sensitive lineage4.9 None
SRR1173310 MDR-TB None
SRR1175506 Sensitive lineage4.9 None
SRR1173777 Other lineage4 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1175487 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180148 Sensitive lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR1180250 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180270 Other lineage2.2.1 None
SRR1180319 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1180406 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1181091 Other lineage2.2.1.1 None
SRR1181325 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181390 Sensitive lineage2 None
SRR1181351 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1183106 Other lineage2.2.1.1 None
SRR1181402 Sensitive lineage4.9 None
SRR1183144 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR11972367 Sensitive lineage2.2.1 None
SRR12006550 Other lineage1.2.1.2 None
SRR1196545 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR14801749 Sensitive None
SRR15316126 Sensitive lineage2.2.1 None
SRR16156775 Other lineage4.9 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR1791747 Other La1.8.1 None
SRR1792478 HR-TB La1.7.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR19295647 Sensitive lineage4.9 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR20970016 Other lineage2.2 None
SRR20969708 HR-TB lineage2.2 None
SRR20632814 Sensitive lineage4 None
SRR20969731 Other lineage2.2.1 None
ERR176751 HR-TB None
SRR20970043 MDR-TB lineage2.2.1 None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692899 Other lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR8692905 HR-TB None
SRR8692825 Other lineage4.9 None
ERR176778 HR-TB None
SRR3675455 Sensitive lineage4 None
SRR3675472 Sensitive lineage4.9 None
ERR4814312 Other lineage4 None
SRR3675477 Other lineage4.9 None
ERR176779 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675209 Sensitive lineage4.9 None
SRR3675488 HR-TB None
SRR3675210 Sensitive lineage4.9 None
ERR4814639 HR-TB lineage4 None
ERR1750943 Sensitive lineage4 None
SRR3675222 Other None
ERR4815471 Other lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
ERR702405 Sensitive lineage2.1 None
ERR1750907 RR-TB None
ERR181824 HR-TB lineage4 None
SRR3675246 Sensitive lineage4 None
ERR1750938 Other lineage4.4.1 None
SRR3675249 Sensitive lineage4.9 None
SRR3675270 HR-TB None
ERR1750944 Other lineage4.1.2 za
SRR3675265 Other lineage4 None
SRR3675292 Sensitive lineage4 None
ERR176568 Other lineage4.3 None
ERR4814976 Other lineage4.9 None
ERR176643 HR-TB None
ERR4816964 Other lineage4.9 None
SRR3675501 HR-TB None
ERR181887 HR-TB None
ERR4815022 Other lineage3.1.2.1 None
ERR2229531 Sensitive lineage4.8 None
ERR176651 HR-TB None
SRR3675547 Other lineage4.9 None
SRR3675510 Other None
SRR3675541 Sensitive lineage4.9 None
SRR3675542 Other lineage4.9 None
ERR212033 HR-TB None
ERR4816151 Other lineage4.8 None
ERR4816322 Other lineage4.9 None
ERR4816762 Other lineage4;lineage2 None
ERR212125 HR-TB lineage4 None
SRR3675577 Sensitive lineage4.9 None
ERR4816548 MDR-TB lineage4.5 None
ERR4816470 Other lineage3 None
ERR4816466 HR-TB None
ERR216965 HR-TB lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR4815815 Sensitive lineage4 None
SRR7898221 MDR-TB lineage1.1.2 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4817667 HR-TB lineage4.8 None
ERR4818710 Sensitive lineage4.9 None
ERR2512512 HR-TB lineage3 None
ERR2446566 Other lineage4.1 None
ERR4818110 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4818252 Other lineage4.1.1.2 None
SRR5341366 Sensitive lineage4 None
ERR2513259 Other lineage3 None
ERR4818561 HR-TB lineage4 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818536 Other lineage4.9 None
ERR4819051 Other lineage4 None
ERR4819314 Other lineage1.1.1 None
SRR5341373 HR-TB lineage4 None
SRR5341461 Sensitive lineage4 None
SRR5341387 Other lineage4 None
SRR5341400 HR-TB lineage4 None
ERR2514552 Sensitive lineage3 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341425 Other lineage4 None
SRR5341432 HR-TB lineage4 None
ERR4819357 Other lineage4.9 None
ERR4819462 Other lineage4 None
ERR4819546 HR-TB lineage3 None
ERR2514327 HR-TB lineage4.8 None
SRR5341298 Sensitive lineage4 None
SRR5341293 HR-TB lineage4 None
SRR5341455 Sensitive lineage4 None
ERR4820822 HR-TB lineage1.1.2 None
SRR5341299 Sensitive lineage4 None
SRR5341300 Other lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341308 Sensitive lineage4 None
ERR4819933 Other lineage4.9 None
SRR5341315 Sensitive None
SRR5341313 HR-TB None
ERR502511 Sensitive lineage4.9;lineage2.1 None
SRR5341456 Other None
SRR5341467 Other lineage4 None
SRR5341330 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2515230 Sensitive lineage4.8 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341469 Other lineage4 None
SRR6045450 Other lineage4.9 None
SRR6045664 Other lineage4.2.1 None
SRR6045480 Other lineage4.1.1 None
ERR2652933 Other lineage4.4.1.1 None
SRR6045503 HR-TB None
SRR6045519 HR-TB None
SRR5535933 HR-TB None
ERR4821655 Sensitive lineage4 None
SRR6045706 Sensitive lineage4 None
SRR6046141 Other lineage4.9 None
SRR6044875 HR-TB lineage4.9 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6045832 HR-TB lineage4.9 None
SRR6045892 Sensitive None
SRR6044835 Sensitive lineage4 None
SRR6044838 Other lineage4.9 None
SRR6045002 MDR-TB lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6045010 Other lineage4 None
SRR6045053 Other None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046210 Other lineage4 None
SRR6045191 Sensitive lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6045217 Other lineage4 None
SRR6045267 RR-TB lineage4 None
SRR6046046 Other None
SRR6046397 Other None
SRR6045399 Other None
SRR6046299 HR-TB None
SRR6046385 Other lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR6046878 HR-TB lineage4 None
ERR4828628 MDR-TB lineage4.5 None
ERR4829530 Pre-XDR-TB lineage4.8 None
ERR2851356 Sensitive lineage4.9 None
SRR6046492 Other None
SRR6046802 Other lineage4 None
SRR6046897 Sensitive lineage4 None
ERR323037 HR-TB lineage4 None
SRR6511621 HR-TB None
ERR4831546 HR-TB lineage2.2 None
ERR485006 HR-TB lineage4.9 None
ERR4831117 HR-TB None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831638 Sensitive None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR9970980 Other lineage4.1.2 None
ERR502510 Sensitive lineage4 None
SRR6789624 MDR-TB lineage4.1 None
ERR502943 HR-TB None
SRR9971270 RR-TB lineage2.2.1 None
SRR7496471 Sensitive None
SRR6981961 Sensitive lineage2.2.1 None
SRR7496523 Other lineage4.7 None
SRR9970979 Sensitive lineage4.8 None
SRR7535082 Sensitive lineage4 None
SRR9970978 Sensitive lineage4.1.2 None
ERR323045 HR-TB None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9971112 Other lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
ERR323107 Other lineage4 None
DRR188519 Other lineage4.4.2 None
ERR323066 Sensitive lineage4 None
ERR323085 Sensitive lineage4 None
ERR323108 HR-TB lineage4 None
ERR1023525 HR-TB lineage4 None
ERR067712 HR-TB lineage4 None
ERR067699 HR-TB lineage4 None
ERR1063855 Other lineage4 None
ERR1034652 Other None
ERR1034634 HR-TB None
ERR1035122 Sensitive None
ERR1063862 HR-TB None
ERR1063896 Sensitive None
ERR1063858 HR-TB None
ERR1063859 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR137286 Sensitive lineage4 None
ERR108471 HR-TB lineage4 None
ERR133825 Sensitive lineage4 None
ERR1213930 Other lineage4.3.2 pe
ERR3283010 Other La1 None
ERR323115 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3439441 Other La1.8.1 None
ERR3283028 Other None
ERR3283031 HR-TB None
ERR3283014 HR-TB None
ERR3283021 HR-TB None
ERR3283025 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283040 HR-TB None
ERR3283047 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3445503 HR-TB None
ERR3445504 HR-TB None
ERR349265 Sensitive lineage4 None
ERR373946 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363426 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797015 HR-TB None
ERR3797048 HR-TB None
ERR3797047 HR-TB lineage4 None
ERR3797065 MDR-TB lineage4 None
ERR3797060 Other La1.8.1 None
ERR3797081 Sensitive lineage4 None
ERR3797073 HR-TB La1.8.1 None
ERR3797079 Sensitive lineage4 None
ERR3797063 HR-TB None
ERR3797080 HR-TB lineage4.9 None
ERR3797064 Sensitive None
ERR4024991 Other None
ERR3797087 Sensitive lineage4 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR400336 Sensitive lineage4 None
ERR3797086 Other lineage4.9 None
ERR405209 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4178226 Sensitive lineage4 None
ERR4188247 HR-TB None
ERR4178309 Other lineage4.1.2.1 None
ERR473334 HR-TB lineage4.9 None
ERR4596902 HR-TB lineage3 None
ERR4596910 Sensitive lineage4 None
ERR473332 Other lineage4 None
ERR473303 Sensitive lineage4.9 None
ERR4769419 Other lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4769442 HR-TB lineage4 None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4769495 Other La1.3 None
ERR4769474 HR-TB lineage4 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769514 Other La1.3 None
ERR4769497 HR-TB La1.2 None
ERR4769516 Other La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769518 Sensitive lineage4.9 None
ERR4769552 Other La1.3 None
ERR4796254 Sensitive lineage4 None
ERR4769555 Other La1.3 None
ERR4796929 Sensitive lineage4 None
ERR4796577 MDR-TB None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4797184 Sensitive lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4797474 Other None
ERR4797264 Sensitive None
ERR4798099 Other None
ERR4798431 HR-TB None
ERR4798262 HR-TB La1 None
ERR4798823 HR-TB lineage4 None
ERR4799378 Sensitive lineage4 None
ERR4811031 Sensitive lineage4.5 None
ERR4799513 HR-TB lineage2.2 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4811030 Sensitive None
ERR6359070 Other lineage4.9 None
ERR6359066 HR-TB lineage4 None
ERR4811493 HR-TB None
ERR6198317 Other La1.2 None
ERR6358951 HR-TB lineage4 None
ERR6358979 Other None
ERR6359045 HR-TB None
ERR6359074 HR-TB lineage4.9 None
ERR6359069 Other lineage4.9 None
ERR6866022 Other None
ERR6865502 Sensitive lineage4 None
ERR6865513 Other lineage4.1.2.1 None
ERR6866547 Sensitive lineage4 None
ERR6866410 Sensitive None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6866639 Other None
ERR736831 HR-TB lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR6866807 HR-TB lineage4 None
ERR736856 HR-TB lineage4 None
ERR736834 Sensitive lineage4 None
ERR736837 Other lineage4.9 None
ERR736848 HR-TB None
ERR736872 Sensitive lineage4 None
ERR736875 HR-TB lineage4 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR751326 Sensitive lineage4 None
ERR7911670 Pre-XDR-TB lineage2.2 None