Rv0668 - c.-294C>G
Drug resistance types
30 Sensitive
4 RR-TB
85 HR-TB
6 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
50 Other
lineage Counts
| lineage | Count |
|---|---|
| 70 | |
| lineage4.1.2.1 | 16 |
| lineage2.2.1 | 7 |
| La1.8.1 | 5 |
| lineage4.9 | 21 |
| lineage3 | 1 |
| lineage4 | 13 |
| lineage1.1 | 1 |
| lineage4.1 | 2 |
| lineage4.3.3 | 4 |
| lineage3.1 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.1 | 3 |
| lineage4.6.1.1 | 2 |
| lineage4.6.2.2 | 2 |
| La1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.3.2 | 1 |
| lineage4.8 | 2 |
| lineage4.9.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.2 | 1 |
| lineage2 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.4.1.1 | 2 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 177 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341456 | Other | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR2693254 | Other | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR5431730 | Other | La1.8.1 | None | ERR2693239 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR4821053 | Other | lineage3 | None | ERR2446118 | Other | lineage4.1.2.1 | nl | ERR278594 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045555 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6046133 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6325444 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6046514 | HR-TB | None | ERR2517489 | Sensitive | lineage4.1.2.1 | nl | SRR6046594 | HR-TB | lineage4 | None | SRR6325448 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | SRR6046644 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325447 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6831950 | Other | lineage4.3.3 | None | ERR294248 | HR-TB | None | ERR4831117 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR3283014 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR323055 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR108471 | HR-TB | lineage4 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323041 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1034634 | HR-TB | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283017 | HR-TB | None | ERR3283028 | Other | None | ERR3283024 | Other | None | ERR3283031 | HR-TB | None | ERR3283032 | HR-TB | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797014 | Other | None | ERR3797016 | HR-TB | None | ERR3797024 | Other | lineage4.9 | None | ERR3797043 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797017 | Other | None | ERR3797060 | Other | La1.8.1 | None | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR3797046 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797061 | Other | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR4188247 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4811493 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4188350 | HR-TB | None | ERR4769427 | Other | La1.2 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR6358837 | HR-TB | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR6359045 | HR-TB | None | ERR6866410 | Sensitive | None | ERR736848 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR245758 | Other | lineage4.9.1 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR069989 | HR-TB | lineage2 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR13837920 | Other | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR13861168 | RR-TB | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861333 | Sensitive | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR1640750 | HR-TB | None | SRR1791696 | Other | La1.8.1 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR8692790 | RR-TB | lineage4 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692800 | Other | lineage4 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692824 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR8692888 | Other | lineage4.9 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR4813861 | Other | lineage4.3.3 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR1035239 | HR-TB | None | ERR161033 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675482 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675486 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675234 | Other | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675545 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212034 | HR-TB | None | ERR3275215 | Other | lineage4.1.2.1 | nl | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR4035800 | HR-TB | lineage4.1.2 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4820268 | Sensitive | lineage4.9 | None |
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