lineage | Count |
---|---|
25 | |
lineage2.2.1 | 5 |
lineage4.9 | 6 |
lineage4.1 | 1 |
lineage4 | 3 |
lineage2.2 | 6 |
lineage2.2.1.2 | 2 |
La1.2 | 1 |
lineage4.9.1 | 1 |
lineage4.5 | 1 |
lineage4.1.2.1 | 1 |
lineage1.1.1 | 1 |
lineage3 | 1 |
lineage4.4.1.1 | 1 |
lineage7;lineage2.2.1.2 | 1 |
spoligotype | Count |
---|---|
None | 56 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675270 | HR-TB | None | ERR212121 | HR-TB | None | SRR5535933 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045450 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341456 | Other | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6046133 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR6045399 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6045233 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046492 | Other | None | SRR6046594 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR3797046 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR8217918 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR3797036 | HR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR245758 | Other | lineage4.9.1 | None | ERR752229 | Other | lineage4.5 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR4796577 | MDR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4811493 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR17658565 | Other | lineage3 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR2101405 | MDR-TB | lineage4.4.1.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None |
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