Rv3596c - p.Thr375Ser

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
7 Sensitive 0 RR-TB 23 HR-TB 4 MDR-TB 0 Pre-XDR-TB 2 XDR-TB 31 Other
lineage Counts
lineage Count
lineage4.9 29
lineage4.9;lineage6.1.3 1
1
M.canetti;lineage4.9;lineage9 1
M.canetti;lineage4.9 2
lineage4.9.1 1
lineage2.2.1 6
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.5 1
lineage4.9;lineage6.3 1
lineage2.2.1.2 3
lineage1.1.1 1
lineage4.9;lineage7 1
lineage2.2 1
M.canetti;lineage2.2 2
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.6.3;lineage4.9 1
lineage2.1;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.9;lineage9 1
lineage4.1.2.1 3
La1;lineage4.9 1
lineage4.8 1
M.canetti;lineage1 1
spoligotype Counts
spoligotype Count
None 67
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045217 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4796577 HR-TB None
SRR3675270 Other lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR5535933 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR245758 Other lineage4.9.1 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR4769450 Other lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR752229 Other lineage4.5 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR20970016 Other lineage2.2.1 None
SRR18549032 HR-TB lineage2.2.1.2 None
SRR20969708 HR-TB lineage2.2.1 None
SRR14066533 Sensitive lineage1.1.1 None
SRR20969731 Other lineage2.2.1 None
SRR6046594 Sensitive lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4799513 HR-TB lineage2.2 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR6045053 Other lineage4 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR13423649 Sensitive lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR8217918 HR-TB lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR11662690 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR6045555 Other lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR1175127 Other lineage2.2.1.2 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4799025 Other lineage4.8 None
ERR2446566 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR2660539 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR6044942 HR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR6046485 Other lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None