lineage | Count |
---|---|
La2 | 1 |
71 | |
lineage3.1 | 2 |
lineage4.9 | 3 |
lineage4 | 8 |
lineage3.1.2 | 1 |
lineage4.3.3 | 1 |
La1.2 | 1 |
La1 | 1 |
lineage2.2 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage2.2.1.2 | 2 |
lineage2.2.1 | 2 |
lineage4.9;La1 | 1 |
lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 97 |
ID | Drug resistance | Lineage | Country iso2 | ERR502524 | HR-TB | La2 | None | ERR294266 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | SRR8217918 | HR-TB | None | ERR323055 | HR-TB | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1034634 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1034652 | Other | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3283028 | Other | None | ERR3283014 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797083 | HR-TB | None | ERR387051 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4423491 | MDR-TB | lineage4.3.3 | None | ERR473332 | Other | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4188247 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR736865 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736835 | HR-TB | None | ERR736848 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR6358837 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9119669 | HR-TB | None | ERR987722 | HR-TB | None | SRR14782405 | HR-TB | None | SRR1172310 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1174897 | HR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR23961542 | Other | lineage4.9;La1 | None | ERR176740 | HR-TB | None | ERR176643 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR212123 | Other | None | ERR176751 | HR-TB | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675571 | HR-TB | None | SRR5341432 | HR-TB | lineage4 | None | ERR4818929 | HR-TB | None | ERR234659 | HR-TB | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR6045526 | HR-TB | None | SRR5341330 | HR-TB | None | SRR5341470 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046397 | Other | None | SRR6045399 | Other | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | ERR323036 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046644 | HR-TB | None | ERR4831117 | HR-TB | None |
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