Rv0682 - c.249C>T
Drug resistance types
54 Sensitive
29 RR-TB
120 HR-TB
59 MDR-TB
9 Pre-XDR-TB
3 XDR-TB
283 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.7 | 2 |
| lineage4.9 | 204 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.7.1 | 1 |
| lineage4.1.2 | 2 |
| lineage3 | 11 |
| lineage4.8 | 11 |
| lineage2.1 | 5 |
| lineage2.2.1 | 37 |
| La1.6;La3;lineage4.9 | 2 |
| lineage4.3.4.2.1 | 4 |
| lineage3.1.3 | 1 |
| lineage4 | 8 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7;lineage4.9;lineage7 | 3 |
| La2;lineage4.9 | 2 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage4.1.2.1 | 21 |
| lineage4.6.1.1 | 1 |
| lineage2.1;lineage4.9 | 15 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage1.1.2 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 10 |
| La1.7;M.canetti;lineage4.9 | 4 |
| lineage4.2.2.2 | 1 |
| M.canetti;lineage4.9 | 6 |
| La1.7;lineage4.9 | 6 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage5.2 | 2 |
| lineage4.9;lineage6.3 | 8 |
| lineage1.1.3.2 | 2 |
| lineage4.3.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.3 | 5 |
| lineage2.2.1.1 | 6 |
| lineage4.3.4.1 | 5 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| La3;lineage2 | 1 |
| La1.2 | 1 |
| lineage1.2.2.2 | 2 |
| La3;lineage2.2.1 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage6.1.3 | 2 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.2.BCG | 2 |
| lineage4.6.2.2 | 3 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| 25 | |
| lineage4.6.3;lineage4.9 | 2 |
| La3;lineage4.9 | 8 |
| lineage4.5 | 1 |
| La1.8.1 | 3 |
| lineage2.2 | 5 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.1;lineage4.8 | 2 |
| lineage4.1.3 | 2 |
| La3;lineage4.3.4 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1.2.BCG;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.1.1 | 4 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La3 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage4.1 | 1 |
| La3;lineage4.8 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage4.8.1 | 1 |
| La1.7 | 2 |
| La3;lineage2.1;lineage4.9 | 3 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.1.1.3 | 2 |
| M.canetti;lineage4.2 | 1 |
| La1.6;lineage4 | 1 |
| lineage3.1;lineage9 | 1 |
| La1;lineage4.9 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage2.2.1.2 | 2 |
| lineage6.3.1 | 1 |
| La2;lineage2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La3;lineage1.1.2 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 2 |
| lineage3.1.2.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.2.1 | 2 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage1.1.1 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.1;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.8;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 557 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819932 | Other | lineage4.7 | None | SRR1173355 | Other | lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4798504 | RR-TB | lineage3 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR1173633 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR6046305 | Sensitive | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | ERR736848 | Other | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | ERR3283044 | Other | lineage4 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR4799025 | Other | lineage4.8 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR3675586 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | ERR4820335 | Other | lineage4.1.2.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | SRR6045526 | Other | lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4817628 | Sensitive | lineage4.8 | gb | SRR1173118 | Other | lineage2.2.1 | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR3797085 | Other | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR7821123 | Other | lineage1.1.3.2 | None | ERR3273109 | HR-TB | lineage4 | None | ERR2446566 | Other | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR3797070 | Other | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR1196566 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR363490 | Other | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR4819546 | HR-TB | lineage3 | None | ERR926164 | Other | lineage4.9 | None | ERR7821126 | Other | lineage1.1.3.2 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR363453 | Other | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR1172234 | Other | lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR6198317 | Other | La1.2 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | ERR4818347 | Other | lineage4.1.2 | None | SRR1158918 | Other | lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR3416776 | Other | lineage2.1 | None | SRR5341467 | Other | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR9787165 | Other | lineage6.1.3 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR3675260 | Sensitive | lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR1915487 | Other | La1.2.BCG | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR6045503 | Other | lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR7496523 | Other | lineage4.7 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR5341456 | Other | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502511 | HR-TB | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR363446 | Other | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR7496509 | Other | None | ERR9786671 | Other | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR1184372 | MDR-TB | None | ERR234659 | HR-TB | None | SRR28044634 | Other | lineage3 | None | ERR2514692 | Other | None | SRR1172857 | Other | None | SRR7496517 | Other | None | ERR4407463 | HR-TB | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR3797029 | Other | lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR1169194 | Other | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR6866639 | HR-TB | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR9786569 | Other | lineage4.8 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7535082 | Other | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6045548 | Other | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR6046066 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR502912 | Other | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR6789621 | Other | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR1173400 | Other | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None | ERR11465801 | Other | lineage4.3.4.1 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR11465830 | Sensitive | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1173562 | Sensitive | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675585 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR926163 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | SRR3675221 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR9786421 | Other | lineage4.1.2.1 | None | SRR1165699 | Other | lineage4.9 | None | ERR12015084 | Other | lineage4.8 | None | SRR21732980 | Other | lineage4.3.3 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR176751 | HR-TB | lineage4.9 | None | SRR1184308 | RR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR21690574 | Other | lineage4.1.2.1 | None | SRR5341453 | Other | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | SRR5341293 | Sensitive | lineage4.9 | None | ERR4821276 | Sensitive | lineage3 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR9786440 | Other | lineage4.1 | None | ERR12015083 | Other | La3;lineage4.8 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | SRR3675222 | Other | La1.7 | None | SRR10808730 | Other | lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR2229542 | Other | lineage4.8 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | ERR9786445 | Other | lineage4.8 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR4815752 | Other | lineage4.9 | None | SRR1172817 | Other | La3 | None | ERR11465024 | Other | lineage4.1.1.3 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | SRR6044855 | Sensitive | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | ERR9786617 | Other | lineage4.1.1.1 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR369159 | Other | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR3675572 | Other | None | ERR1063896 | HR-TB | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR9786604 | Other | None | ERR9786843 | Other | None | SRR7535086 | Other | None | SRR18213713 | HR-TB | None | ERR987722 | MDR-TB | None | ERR212001 | HR-TB | None | SRR28351554 | Other | La1.6;lineage4 | None | ERR4816999 | Other | None | SRR1196768 | MDR-TB | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR9786444 | Sensitive | lineage4.8 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR5341373 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SAMN02585910 | RR-TB | lineage2.2.1 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR2514390 | Sensitive | lineage3.1.2.1;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR6785497 | Sensitive | lineage4.3.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR6045217 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | ERR1035157 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR3675502 | Sensitive | lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR4800341 | HR-TB | lineage3 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR373945 | Other | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR5341330 | Other | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR6785413 | Other | lineage2.2.1 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | SRR5341298 | Other | lineage4.9 | None | SRR1710057 | Other | lineage2.1 | None | ERR363499 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6046839 | Other | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR926165 | Other | lineage4.9 | None | SRR3675390 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR926156 | Other | lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | ERR176741 | Other | lineage4.9 | None | SRR3675214 | Other | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR3675312 | Sensitive | lineage4.9 | None | SRR3675446 | RR-TB | lineage4.9 | None | ERR11138607 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR15368973 | Other | lineage4.9 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | ERR2027263 | Other | lineage4 | None | ERR373946 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR26159043 | Other | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR926160 | Other | lineage4.9 | None | SRR6785227 | Other | lineage2.2.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR3675248 | Other | lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR7496472 | Other | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | SRR1196474 | Other | lineage3.1.1 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR363498 | Other | lineage4.9 | None | SRR6785268 | Sensitive | lineage4.2.1 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR1181289 | RR-TB | lineage2.2.1 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR9588018 | MDR-TB | lineage4.4.1.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR11049020 | Other | lineage4.8 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6785267 | Other | lineage2.2.1 | None | ERR11466499 | Other | lineage4.3.4.1 | None | SRR3675457 | Other | lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR1196546 | Other | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4769450 | Other | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR3675311 | Other | lineage4.9 | None | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | ERR363479 | Other | lineage4.9 | None | ERR4407452 | Other | lineage3 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR1173788 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR1184381 | MDR-TB | None | ERR4815604 | Other | None | ERR9117709 | Other | None | SRR6789626 | Other | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR25827682 | Other | None | SRR3675236 | Other | None | ERR349300 | Other | lineage4.9 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR6358979 | HR-TB | lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR363449 | Other | lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR3675549 | Other | lineage4.9 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | SRR6785262 | Sensitive | lineage4.2.1 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR3439432 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR13423649 | Other | lineage2.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR12015085 | Other | lineage4.8 | None | ERR363421 | Other | lineage4.9 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR2514821 | Other | lineage2.2.1 | None | SRR1159378 | Other | lineage4.9 | None | SRR18003019 | Other | lineage2.2.1 | None | ERR11465025 | Other | lineage4.1.1.3 | None |
|---|
