Rv0682 - c.156T>G
Drug resistance types
34 Sensitive
3 RR-TB
22 HR-TB
6 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 52 |
| lineage4.9;lineage9 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.4.2 | 1 |
| lineage4.9;lineage7 | 4 |
| lineage2.2.1 | 9 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.7;lineage4.9 | 4 |
| lineage4.6.5 | 2 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.8 | 1 |
| M.canetti;lineage1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage1.1.1;lineage4 | 1 |
| lineage3 | 1 |
| La1;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage2.2 | 3 |
| 1 | |
| lineage5.1.4 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.2.1 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4 | 4 |
| La1.7.1 | 1 |
| La1.2;La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 107 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046245 | Other | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR3675280 | RR-TB | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | SRR11662694 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR10808730 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR6046878 | Other | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR3675270 | Other | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR3675292 | Sensitive | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR12708416 | Sensitive | None | ERR6359082 | Other | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR387051 | Other | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR6045053 | Other | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046046 | Other | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR400345 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769450 | Other | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR400326 | Other | lineage4.9 | None |
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