Rv0668 - c.2997C>G
Drug resistance types
13 Sensitive
5 RR-TB
39 HR-TB
6 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
91 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 54 |
| lineage2.1 | 2 |
| lineage4 | 4 |
| M.canetti;lineage4.9 | 4 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.8 | 1 |
| lineage2.2.1 | 14 |
| lineage4.3.4.2.1 | 1 |
| lineage2.1;lineage4.9 | 5 |
| 16 | |
| lineage4.6.2.2 | 2 |
| lineage1.1.2 | 2 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La3;lineage4.9 | 6 |
| La1;lineage4.9 | 1 |
| lineage4.1.1.3 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage2.2 | 2 |
| lineage3.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 3 |
| lineage4.3.4 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage3 | 2 |
| lineage2.2.2;lineage4 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage5.2 | 2 |
| La3 | 2 |
| lineage2.2.1.2 | 2 |
| La1.2 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.3.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.7;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 159 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045191 | Sensitive | lineage4.9 | None | SRR3416776 | Other | lineage2.1 | None | SRR6045053 | Other | lineage4 | None | SRR6046046 | Other | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR4799025 | Other | lineage4.8 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR13267017 | Pre-XDR-TB | lineage2.2.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR1035157 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR6046593 | Other | lineage4.9 | None | ERR4811105 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR6789626 | Other | None | ERR4811311 | Other | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR1196546 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR29093909 | Other | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR29017461 | Other | La3;lineage4.9 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR11465025 | Other | lineage4.1.1.3 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR20969677 | HR-TB | lineage2.1 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR28119777 | Other | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR4816656 | Other | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR4769452 | Other | lineage4.9 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR28119752 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184294 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR736875 | HR-TB | lineage4.9 | None | SRR1173363 | Other | None | SRR6046878 | Other | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR3283042 | Other | lineage4.9 | None | ERR4796577 | HR-TB | None | SRR1173778 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR1173355 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR7898221 | MDR-TB | lineage1.1.2 | None | ERR4810741 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR4811142 | RR-TB | None | ERR4811075 | Other | None | SRR7496471 | Sensitive | lineage4 | None | SRR28119753 | Other | lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR1172728 | RR-TB | La3 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR1172817 | Other | La3 | None | SRR1173400 | Other | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR176751 | Other | lineage4.9 | None | SRR29016780 | Other | lineage4.9 | None | SRR23961549 | Other | La1.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR1184381 | MDR-TB | None | ERR2514692 | Other | None | ERR212001 | HR-TB | None | SRR1172857 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR4817060 | Other | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR2514821 | Sensitive | lineage2.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR9786604 | Other | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4819241 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR1172951 | Other | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1196583 | Other | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1175074 | Other | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None |
|---|
