Rv3244c - c.-891G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
45 Sensitive
1 RR-TB
24 HR-TB
6 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 70 |
| lineage4 | 3 |
| lineage1.1.2 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage3 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage2.2.1 | 5 |
| M.canetti;lineage4.9 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| lineage2.2.1.2 | 3 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage4.1.2.1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| 2 | |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 114 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6044875 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR29097004 | Other | lineage3 | None | SRR6045526 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR6046802 | Other | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR3797080 | Sensitive | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR369158 | Other | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | ERR363502 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR29096150 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR176740 | Other | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR2514692 | Other | None | ERR987722 | MDR-TB | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4798504 | RR-TB | lineage3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR26331611 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR29097037 | Other | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR29096410 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None |
|---|
