Rv1630 - c.1014T>C
Drug resistance types
33 Sensitive
10 RR-TB
109 HR-TB
18 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
118 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 53 |
| 95 | |
| lineage4 | 17 |
| lineage2.2.1 | 21 |
| lineage4.1.2.1 | 16 |
| lineage2.2.1.1 | 5 |
| lineage1.1 | 1 |
| lineage4.6.2.2 | 5 |
| lineage2.2 | 6 |
| lineage3 | 10 |
| lineage3.1 | 2 |
| lineage4.7 | 1 |
| lineage4.8.1 | 1 |
| lineage4.4.2 | 1 |
| La1.8.1 | 5 |
| La1.3 | 7 |
| La1.2 | 2 |
| lineage4.9;La1.3 | 2 |
| lineage1.2.2.2 | 1 |
| La1 | 1 |
| lineage4.3.3 | 4 |
| lineage4.4.1.1 | 3 |
| lineage4.3.2 | 1 |
| lineage4.5 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage4.6.5 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.8 | 3 |
| lineage6.1.3 | 1 |
| lineage2.2.2 | 2 |
| lineage2.2.1.2 | 2 |
| lineage1.2.1.2 | 1 |
| lineage1.1.1 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage4.2.1 | 1 |
| La1.4 | 1 |
| lineage4.4 | 1 |
| lineage4.1 | 2 |
| La1.7.1 | 1 |
| lineage3.1.3 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.4.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.1.2 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 297 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6044875 | HR-TB | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046250 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046046 | Other | None | SRR6046225 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2446118 | Other | lineage4.1.2.1 | nl | SRR6046514 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR6046460 | HR-TB | None | SRR6046492 | Other | None | ERR4830353 | Other | None | SRR6046644 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6982365 | Other | lineage2.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR294248 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR294266 | HR-TB | None | ERR3275190 | Other | lineage3 | nl | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR8217918 | HR-TB | None | ERR5311090 | HR-TB | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR7496471 | Sensitive | None | ERR323041 | HR-TB | None | ERR323038 | HR-TB | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR1034652 | Other | None | ERR3283032 | HR-TB | None | ERR3283024 | Other | None | ERR3283058 | Other | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3439441 | Other | La1.8.1 | None | ERR3797082 | Other | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797017 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR3797044 | Other | None | ERR3797060 | Other | La1.8.1 | None | ERR3797061 | Other | None | ERR3797083 | HR-TB | None | ERR4188350 | HR-TB | None | ERR387051 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4596902 | HR-TB | lineage3 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769408 | Other | La1.3 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769495 | Other | La1.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769551 | Other | La1.3 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4769555 | Other | La1.3 | None | ERR4796577 | MDR-TB | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4798262 | HR-TB | La1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR4799025 | Pre-XDR-TB | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR6359070 | Other | lineage4.9 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736835 | HR-TB | None | ERR6359069 | Other | lineage4.9 | None | ERR6866547 | Sensitive | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR736839 | Other | None | ERR752229 | Other | lineage4.5 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR8976043 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR990545 | Other | lineage3 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9896144 | Other | lineage3 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13861163 | Sensitive | lineage4.9 | None | SRR13837579 | HR-TB | lineage4.9 | None | SRR13861153 | Other | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861329 | Other | lineage4.9 | None | SRR13861324 | Other | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861399 | Other | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861611 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR17658565 | Other | lineage3 | None | SRR1640750 | HR-TB | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1791696 | Other | La1.8.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR3675482 | HR-TB | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | ERR4815310 | Other | None | SRR3675222 | Other | None | ERR161033 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR163965 | Sensitive | lineage4.3.4.2.1 | mw | ERR4814639 | HR-TB | lineage4 | None | SRR3675488 | HR-TB | None | SRR3675486 | HR-TB | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675234 | Other | None | ERR1750938 | Other | lineage4.4.1 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675501 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675270 | HR-TB | None | ERR4815550 | Other | lineage4 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR4816964 | Other | lineage4.9 | None | ERR176751 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675510 | Other | None | ERR1950011 | Sensitive | lineage4.8 | None | ERR212034 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR2446509 | Other | lineage3 | nl | ERR212123 | Other | None | ERR212121 | HR-TB | None | ERR4816470 | Other | lineage3 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR7898221 | MDR-TB | lineage1.1.2 | None | ERR4816656 | HR-TB | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4818394 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | None | ERR2513259 | Other | lineage3 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR3275215 | Other | lineage4.1.2.1 | nl | ERR4819314 | Other | lineage1.1.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4818929 | HR-TB | None | ERR4818536 | Other | lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4819933 | Other | lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR5341456 | Other | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | ERR2693239 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821053 | Other | lineage3 | None | ERR2515228 | Other | lineage2.2.1 | None | ERR2693231 | Other | None | SRR5535933 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | ERR2693230 | Other | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR278594 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | ERR2660539 | Other | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR2693227 | Other | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None |
|---|
