Rv1630 - c.1014T>C


Drug resistance types
33 Sensitive 10 RR-TB 109 HR-TB 18 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 118 Other
lineage Counts
lineage Count
lineage4.9 53
95
lineage4 17
lineage2.2.1 21
lineage4.1.2.1 16
lineage2.2.1.1 5
lineage1.1 1
lineage4.6.2.2 5
lineage2.2 6
lineage3 10
lineage3.1 2
lineage4.7 1
lineage4.8.1 1
lineage4.4.2 1
La1.8.1 5
La1.3 7
La1.2 2
lineage4.9;La1.3 2
lineage1.2.2.2 1
La1 1
lineage4.3.3 4
lineage4.4.1.1 3
lineage4.3.2 1
lineage4.5 2
lineage4.1.2.1.1 1
lineage4.6.5 1
lineage4.8;lineage4.1 2
lineage4.8 3
lineage6.1.3 1
lineage2.2.2 2
lineage2.2.1.2 2
lineage1.2.1.2 1
lineage1.1.1 3
lineage1.2.1.2.1 1
lineage4.2.1 1
La1.4 1
lineage4.4 1
lineage4.1 2
La1.7.1 1
lineage3.1.3 1
lineage3;lineage2.1 1
lineage4.3.4.2.1 3
lineage4.4.1 1
lineage4.1.1.3 1
lineage1.1.2 1
lineage4;lineage1.1.2 1
lineage4.1.2 1
lineage4.1.1 1
lineage1.1.3.1 1
spoligotype Counts
spoligotype Count
None 297
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6044875 HR-TB lineage4.9 None
ERR2693232 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6045191 Sensitive lineage4.9 None
SRR6045053 Other None
SRR6045217 Other lineage4 None
SRR6046250 Other lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6045233 HR-TB None
SRR6046046 Other None
SRR6046225 HR-TB None
SRR6046253 HR-TB lineage4.9 None
SRR6046299 HR-TB None
SRR6325442 HR-TB None
SRR6046362 HR-TB None
SRR6325444 HR-TB None
SRR6046382 HR-TB lineage2.2.1 None
ERR2446563 Other lineage2.2.1 nl
ERR2446118 Other lineage4.1.2.1 nl
SRR6046514 HR-TB None
ERR3275196 Other lineage2.2.1 nl
SRR6046460 HR-TB None
SRR6046492 Other None
ERR4830353 Other None
SRR6046644 HR-TB None
SRR6325448 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6325447 HR-TB None
SRR6046878 HR-TB lineage4 None
ERR4831117 HR-TB None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR3077978 Other lineage1.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR6982365 Other lineage2.2.1 None
ERR4831546 HR-TB lineage2.2 None
ERR294248 HR-TB None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR294266 HR-TB None
ERR3275190 Other lineage3 nl
ERR323034 HR-TB lineage3.1 None
ERR323036 HR-TB None
ERR5311099 HR-TB None
ERR5311081 HR-TB None
SRR8217918 HR-TB None
ERR5311090 HR-TB None
SRR9971270 RR-TB lineage2.2.1 None
SRR7496523 Other lineage4.7 None
SRR7496471 Sensitive None
ERR323041 HR-TB None
ERR323038 HR-TB None
SRR9971150 RR-TB lineage4.8.1 None
ERR323055 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323063 HR-TB None
ERR323108 HR-TB lineage4 None
DRR188519 Other lineage4.4.2 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR067699 HR-TB lineage4 None
ERR3283017 HR-TB None
ERR1023502 MDR-TB lineage2.2.1 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR108471 HR-TB lineage4 None
ERR133825 Sensitive lineage4 None
ERR1034652 Other None
ERR3283032 HR-TB None
ERR3283024 Other None
ERR3283058 Other lineage4.9 None
ERR3283048 HR-TB lineage4.9 None
ERR3445504 HR-TB None
ERR3283055 HR-TB None
ERR3439441 Other La1.8.1 None
ERR3797082 Other lineage4.9 None
ERR3468544 HR-TB None
ERR3797016 HR-TB None
ERR3797014 Other None
ERR3797043 HR-TB None
ERR3797036 HR-TB None
ERR3797017 Other None
ERR3797023 HR-TB La1.8.1 None
ERR3797046 HR-TB None
ERR3797044 Other None
ERR3797060 Other La1.8.1 None
ERR3797061 Other None
ERR3797083 HR-TB None
ERR4188350 HR-TB None
ERR387051 HR-TB None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR4596902 HR-TB lineage3 None
ERR473303 Sensitive lineage4.9 None
ERR4596910 Sensitive lineage4 None
ERR4769408 Other La1.3 None
ERR473334 HR-TB lineage4.9 None
ERR473367 Sensitive lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769424 Sensitive lineage4.9 None
ERR4769436 Other La1.3 None
ERR4769418 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4769516 Other La1.3 None
ERR4769495 Other La1.3 None
ERR4769497 HR-TB La1.2 None
ERR4769527 Sensitive lineage4.9 None
ERR4769551 Other La1.3 None
ERR4797285 MDR-TB lineage1.2.2.2 None
ERR4769555 Other La1.3 None
ERR4796577 MDR-TB None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769552 Other La1.3 None
ERR4798262 HR-TB La1 None
ERR4798823 HR-TB lineage4 None
ERR5908228 Other lineage4.3.3 None
ERR4799025 Pre-XDR-TB None
ERR4800527 MDR-TB lineage2.2.1 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR5917710 Other lineage4.1.2.1 None
ERR6358837 HR-TB None
ERR6359070 Other lineage4.9 None
ERR6358991 HR-TB None
ERR6359045 HR-TB None
ERR736835 HR-TB None
ERR6359069 Other lineage4.9 None
ERR6866547 Sensitive lineage4 None
ERR772255 MDR-TB lineage4.3.2 None
ERR736839 Other None
ERR752229 Other lineage4.5 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR7801176 RR-TB lineage4.6.5 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR8976043 HR-TB None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9786444 Sensitive lineage4.8 None
ERR9119096 Other lineage4.3.3 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786843 Other None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
ERR9787153 Other lineage6.1.3 None
ERR990545 Other lineage3 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9896144 Other lineage3 None
SRR069981 HR-TB lineage2.2.2 None
SRR10315551 Sensitive lineage2.2.1 None
SRR1162740 Other lineage4.1.2.1 None
SRR11462861 Other La1.8.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1165423 Other lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1173453 Other lineage4.4.1.1 None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1180137 Other lineage2.2.1 None
SRR1181091 Other lineage2.2.1.1 None
SRR1180172 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1181020 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR1181289 Other lineage2.2.1 None
SRR1183144 Other lineage2.2.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR13423544 Other lineage4.5 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR12006550 Other lineage1.2.1.2 None
SRR13423649 Sensitive lineage2.2.1 None
SRR13861163 Sensitive lineage4.9 None
SRR13837579 HR-TB lineage4.9 None
SRR13861153 Other lineage4.9 None
SRR13861305 Other lineage4.9 None
SRR13861329 Other lineage4.9 None
SRR13861324 Other lineage4.9 None
SRR13861368 RR-TB lineage4.9 None
SRR13861332 Other lineage4.9 None
SRR13861386 HR-TB lineage4.9 None
SRR13861381 MDR-TB lineage4.9 None
SRR13861399 Other lineage4.9 None
SRR13861500 RR-TB lineage4.9 None
SRR13861434 RR-TB lineage4.9 None
SRR13861510 Other lineage4.9 None
SRR13861646 Other lineage4.9 None
SRR13861549 RR-TB lineage4.9 None
SRR13861611 Sensitive lineage4.9 None
SRR14782405 HR-TB None
SRR14066533 Sensitive lineage1.1.1 None
SRR1510066 Other lineage1.2.1.2.1 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR16278274 Other La1.4 None
SRR17658565 Other lineage3 None
SRR1640750 HR-TB None
SRR16627752 RR-TB lineage4.4 None
SRR1791696 Other La1.8.1 None
SRR3675464 HR-TB lineage4.1 None
SRR1792478 HR-TB La1.7.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18909918 Other lineage2.2.1.1 None
SRR20969731 Other lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR20970016 Other lineage2.2 None
SRR22424787 Sensitive lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
SRR20632814 Sensitive lineage4 None
SRR21677886 Sensitive lineage4.9 None
SRR3675482 HR-TB None
SRR6325445 HR-TB None
ERR1035239 HR-TB None
ERR4815310 Other None
SRR3675222 Other None
ERR161033 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
ERR163965 Sensitive lineage4.3.4.2.1 mw
ERR4814639 HR-TB lineage4 None
SRR3675488 HR-TB None
SRR3675486 HR-TB None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR3675234 Other None
ERR1750938 Other lineage4.4.1 None
ERR4815471 Other lineage4.9 None
SRR3675501 HR-TB None
SRR3675280 HR-TB lineage4.9 None
SRR3675270 HR-TB None
ERR4815550 Other lineage4 None
SRR3675284 HR-TB lineage4.9 None
SRR3675456 HR-TB None
SRR3675383 HR-TB None
SRR3675312 HR-TB lineage4 None
ERR4816964 Other lineage4.9 None
ERR176751 HR-TB None
SRR3675545 HR-TB None
SRR3675510 Other None
ERR1950011 Sensitive lineage4.8 None
ERR212034 HR-TB None
SRR3675558 HR-TB None
SRR3675555 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR2446509 Other lineage3 nl
ERR212123 Other None
ERR212121 HR-TB None
ERR4816470 Other lineage3 None
ERR3275709 HR-TB lineage3 nl
SRR7898221 MDR-TB lineage1.1.2 None
ERR4816656 HR-TB None
ERR4817667 HR-TB lineage4.8 None
ERR4815815 Sensitive lineage4 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR2446566 Other lineage4.1 None
ERR4818710 Sensitive lineage4.9 None
ERR4818347 Other lineage4.1.2 None
ERR2229143 Other lineage4.1.1 None
ERR4818394 Other lineage4.9 None
ERR1035138 MDR-TB None
ERR2513259 Other lineage3 None
ERR2509673 Other lineage2.2.1 None
ERR4818607 Sensitive lineage4.9 None
ERR3275215 Other lineage4.1.2.1 nl
ERR4819314 Other lineage1.1.1 None
ERR4819357 Other lineage4.9 None
ERR4819462 Other lineage4 None
ERR4818929 HR-TB None
ERR4818536 Other lineage4.9 None
ERR4818583 Other lineage4.3.3 None
ERR4817554 Other lineage1.1.1 None
ERR4819933 Other lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
SRR5341456 Other None
ERR6359082 Other lineage4.9 None
SRR5341330 HR-TB None
ERR2693239 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4821053 Other lineage3 None
ERR2515228 Other lineage2.2.1 None
ERR2693231 Other None
SRR5535933 HR-TB None
ERR2693254 Other None
ERR2693257 Other None
ERR2693230 Other None
ERR4821143 RR-TB lineage4.9 None
ERR278594 HR-TB None
ERR4821655 Sensitive lineage4 None
ERR2660539 Other lineage4.9 None
ERR4821616 Other lineage1.1.3.1 None
ERR4822138 Other lineage4.1.2.1 None
ERR2693227 Other lineage4.9 None
SRR6045555 HR-TB None
SRR6046133 HR-TB None
SRR5709967 MDR-TB lineage2.2.1 None
SRR5818647 RR-TB lineage4.3.4.2.1 None