Rv3596c - c.714G>T


Drug resistance types
24 Sensitive 7 RR-TB 27 HR-TB 16 MDR-TB 1 Pre-XDR-TB 2 XDR-TB 37 Other
lineage Counts
lineage Count
lineage3 4
lineage4 1
lineage4.9 42
lineage1.1.2 1
lineage3.1.2 1
lineage2.2 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.8 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.9;lineage7 3
lineage2.2.1 4
M.canetti;lineage2.2 2
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.3.4.2.1 4
lineage4.1.1.3 4
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.1;lineage4.9 2
lineage4.1;lineage4.8 2
La1;lineage2;lineage4.9 1
La1;lineage4.9 2
lineage3;lineage4 1
lineage2.2.1.2 2
M.canetti;lineage4.9 2
La1.7;lineage4.2 1
La1.7;M.canetti;lineage4.9 2
lineage4.1.2.1;lineage4.4.1 1
La1.7;lineage4.9;lineage6 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.1.2.1 2
La1.7.1;lineage4.9 1
lineage4.9;lineage6.3 2
lineage4.2.1 1
La1;lineage4.1.2 1
lineage4.1.2.1;lineage4.9 1
2
lineage4.3.4.2 1
lineage2.1;lineage4.9;lineage7 1
La3;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage1.2.2.2 1
La1.8.1 1
lineage4.6.2.2 2
lineage4.1.1.2 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 114
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR990545 Other lineage3 None
ERR4816478 HR-TB lineage4 None
ERR6358951 Sensitive lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR13266892 MDR-TB lineage3.1.2 None
SRR6044835 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR4816151 Sensitive lineage4.8 None
SRR1062918 Other lineage3 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR2513229 MDR-TB lineage2.2.1 None
SRR6046382 Sensitive lineage2.2.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR2199988 MDR-TB lineage4.1.1.3 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR550637 MDR-TB lineage4.1.1.3 None
SRR6044780 Sensitive lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR16156817 Other lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR4821655 HR-TB lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR3675441 Other lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR6046385 Sensitive lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR4819241 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR4818929 HR-TB lineage4.9 None
ERR11252736 Other lineage4.9 None
SRR1049673 Pre-XDR-TB lineage3 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR1183049 RR-TB lineage2.2 None
ERR6358979 Other lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR10808805 Other La1;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
ERR4796929 Sensitive lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR9786843 Other None
ERR212001 HR-TB None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR11342673 RR-TB lineage4.3.4.2 None
ERR4819422 HR-TB lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
SRR1140736 Other lineage4.1.2.1 None
SRR6045010 Sensitive lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1173170 Other lineage4.9 None
SRR1180137 Other lineage2.2.1 None
SRR1175052 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
ERR4797285 MDR-TB lineage1.2.2.2 None
ERR387051 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1791747 Other La1.8.1 None
ERR4820773 HR-TB lineage4.9 None
ERR9896144 Other lineage3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR10809074 Sensitive lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR4820030 Other lineage4.9 None