Rv1630 - c.834G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
61 Sensitive
10 RR-TB
36 HR-TB
16 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
53 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2.1 | 3 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.9 | 87 |
| lineage4.5 | 2 |
| lineage4.3.3 | 4 |
| lineage4.3.4.2.1 | 2 |
| lineage4 | 4 |
| lineage2.2.1 | 16 |
| lineage4.8 | 2 |
| lineage4.4.1.1 | 3 |
| lineage4.3.1 | 1 |
| La1.7;lineage4.9 | 4 |
| lineage4.2.1 | 2 |
| lineage4.1.2.1 | 6 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.2.2 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2.2 | 1 |
| La1.7;lineage4.2 | 1 |
| La1;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage2.2.1.2 | 3 |
| lineage4.1;lineage4.9 | 1 |
| lineage3 | 4 |
| lineage4.6.2.2 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.8.1 | 2 |
| lineage4.1.1.1 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage5.1.4 | 1 |
| La1.8.1 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.9.1 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage1.1.1.1 | 1 |
| lineage6 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| 1 | |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 181 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR3275450 | Other | lineage4 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR3675318 | Other | lineage4.9 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR2446382 | Other | lineage4 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675247 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR11488417 | MDR-TB | lineage4.1.2.1 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR3675552 | Other | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR176741 | Other | lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR6046593 | Other | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | ERR2512606 | HR-TB | lineage3 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR4816476 | Other | lineage3.1.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR20970016 | Other | lineage2.2.1 | None | ERR4812155 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR29097054 | Sensitive | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR11465333 | Sensitive | lineage4.3.4.2.1 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR1791725 | Other | La1.8.1 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR7070223 | HR-TB | lineage3 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046046 | Other | lineage4.9 | None | ERR11465604 | HR-TB | lineage4.8.1 | None | ERR11466061 | Sensitive | lineage4.9.1 | None | ERR4820266 | Sensitive | lineage3 | None | SRR3675279 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR400345 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR29096178 | Sensitive | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR29231528 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | SRR29096399 | Sensitive | lineage2.2.1 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR9787336 | RR-TB | lineage6 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR3675387 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR7240033 | Other | La1.8.1 | None | ERR4769452 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR12708416 | Sensitive | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None |
|---|
