lineage | Count |
---|---|
lineage4.9 | 14 |
lineage3.1.2.1 | 1 |
lineage4.8 | 3 |
16 | |
lineage3 | 3 |
lineage4.1.1.2 | 1 |
lineage2.2.1 | 4 |
lineage4 | 7 |
lineage4.1 | 1 |
lineage2.1 | 1 |
lineage5.1.1 | 1 |
lineage4.3.3 | 1 |
La1.8.1 | 2 |
lineage4.1.1.3 | 1 |
lineage4.1.2 | 1 |
La1.3 | 1 |
lineage1.1.2 | 1 |
lineage2.2 | 3 |
lineage4.7;lineage4.3.4.2 | 1 |
lineage2.2.1.2 | 1 |
lineage4.6.5 | 2 |
lineage1.1.3.1 | 1 |
lineage4.3.2.1 | 1 |
La1.4 | 1 |
lineage2.2.1.1 | 1 |
lineage1.2.1.1 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 72 |
ID | Drug resistance | Lineage | Country iso2 | ERR4816322 | Other | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816417 | Other | lineage4.9 | None | ERR2229198 | MDR-TB | lineage4.8 | None | SRR5341456 | Other | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4816852 | Other | lineage4.9 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR5535933 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6045892 | Sensitive | None | SRR6045053 | Other | None | SRR6046046 | Other | None | SRR6046299 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046492 | Other | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831997 | MDR-TB | lineage2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323107 | Other | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR4820586 | Other | lineage3 | gb | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4799025 | Pre-XDR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769514 | Other | La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6197021 | MDR-TB | lineage4.7;lineage4.3.4.2 | None | ERR6866410 | Sensitive | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR10808805 | Sensitive | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR18572454 | RR-TB | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675270 | HR-TB | None |
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