TB-Profiler
Home
Upload
SRA data
Rv3596c
- c.825G>A
Drug resistance types
1 Sensitive
1 RR-TB
6 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
3
lineage2.2.1.2
2
La1.7;lineage4.9
2
lineage4.3.3
2
M.canetti;lineage4.9
1
lineage4.6.3;lineage4.9
1
1
lineage4.3.4.2
1
lineage3.1.2.1;lineage3.1.2.2
1
lineage2.2.1;lineage4.9
1
Showing 1 to 10 of 11 entries
Previous
1
2
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
16
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR176740
Other
lineage4.9
None
ERR3283025
MDR-TB
La1.7;lineage4.9
None
ERR9119669
HR-TB
lineage4.9
None
ERR987722
MDR-TB
None
ERR987729
HR-TB
lineage3.1.2.1;lineage3.1.2.2
None
SRR11342649
MDR-TB
lineage4.3.3
None
SRR11342673
RR-TB
lineage4.3.4.2
None
SRR1172796
Sensitive
lineage2.2.1.2
None
SRR1175127
Other
lineage2.2.1.2
None
SRR12708406
HR-TB
lineage2.2.1;lineage4.9
None
Showing 1 to 10 of 16 entries
Previous
1
2
Next