lineage | Count |
---|---|
lineage4.9 | 188 |
lineage3 | 3 |
lineage4 | 5 |
lineage4.1.2.1 | 7 |
lineage1.1.2 | 2 |
lineage2.2.1 | 13 |
lineage2.2 | 4 |
La1.8.1 | 4 |
lineage1.1.1;lineage4 | 1 |
La1.2.BCG | 1 |
La1;lineage4.9 | 3 |
lineage4.1.1.3;lineage4.9 | 2 |
lineage4.6.2.2 | 3 |
lineage4.9;lineage6.1.3 | 1 |
4 | |
La1.7;lineage4.9;lineage6 | 1 |
lineage4.3.2.1 | 2 |
lineage4.6.3;lineage4.9 | 1 |
La1.7;lineage4.9 | 7 |
lineage4.8 | 4 |
La2;lineage4.9 | 1 |
La1.2;La1.8.1 | 1 |
lineage4.2.1 | 2 |
lineage4.3.4.2.1 | 2 |
La1.7;lineage4.9;lineage7 | 2 |
lineage4.9;lineage7 | 1 |
lineage4.1.1.1 | 1 |
lineage4.1;lineage4.9 | 2 |
lineage4.5 | 1 |
lineage2.2.1;lineage4 | 1 |
La1.7;lineage3.1;lineage4 | 1 |
La1.2.BCG;lineage4.9 | 1 |
lineage4.3.4.1 | 1 |
lineage1.1.3.1 | 1 |
La1.7.1;La1.7.X-unk4;lineage7 | 1 |
lineage4.4.1.2 | 1 |
La1;lineage4.1.2 | 1 |
lineage2.2.1.2 | 1 |
lineage5.1.4 | 1 |
lineage4.8;lineage4.9 | 2 |
lineage1;lineage4.9 | 1 |
lineage1.1.1 | 1 |
lineage4.2.1.1;lineage4.3.3 | 1 |
La2;lineage2.2 | 1 |
La1.7.1 | 1 |
lineage4.1.2 | 1 |
lineage4.3.1;lineage4.9;lineage6 | 1 |
lineage4.4.1.1 | 1 |
lineage4.1.1.2 | 1 |
La1;lineage2;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 291 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR400326 | Other | lineage4.9 | None |
ERR2514552 | Sensitive | lineage3 | None |
SRR6045371 | Other | lineage4.9 | None |
ERR3273109 | HR-TB | lineage4 | None |
SRR6046802 | Other | lineage4.9 | None |
ERR4816904 | Sensitive | lineage4.1.2.1 | None |
SRR6046564 | Sensitive | lineage4.9 | None |
ERR323037 | Other | lineage4.9 | None |
ERR108471 | HR-TB | lineage4.9 | None |
SRR5341303 | Sensitive | lineage4.9 | None |
ERR13285191 | Sensitive | lineage4.9 | None |
SRR12708372 | Sensitive | lineage4.9 | None |
ERR4819546 | HR-TB | lineage3 | None |
ERR926164 | Other | lineage4.9 | None |
SRR3675247 | Other | lineage4.9 | None |
ERR4797193 | HR-TB | lineage1.1.2 | None |
SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None |
ERR1034634 | HR-TB | lineage4.9 | None |
ERR363447 | Other | lineage4.9 | None |
SRR6045706 | Sensitive | lineage4.9 | None |
SRR6044819 | Sensitive | lineage4.9 | None |
ERR5311094 | HR-TB | lineage4.9 | None |
ERR4769452 | Other | lineage4.9 | None |
ERR4799513 | HR-TB | lineage2.2 | None |
ERR779852 | Sensitive | lineage4.9 | None |
ERR323085 | Sensitive | lineage4.9 | None |
ERR349266 | Sensitive | lineage4.9 | None |
ERR736834 | Sensitive | lineage4.9 | None |
ERR369157 | Sensitive | lineage4.9 | None |
ERR373946 | Sensitive | lineage4.9 | None |
ERR3797060 | Other | La1.8.1 | None |
SRR3675585 | Sensitive | lineage4.9 | None |
SRR3675472 | Sensitive | lineage4.9 | None |
ERR2041725 | MDR-TB | lineage4.1.2.1 | None |
ERR6359082 | Other | lineage4.9 | None |
ERR4797264 | Sensitive | lineage4.9 | None |
ERR4796929 | Sensitive | lineage4.9 | None |
ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None |
SRR5341299 | HR-TB | lineage4.9 | None |
SRR2010299 | MDR-TB | lineage2.2.1 | None |
ERR4818110 | Sensitive | lineage4.9 | None |
SRR1915487 | Other | La1.2.BCG | None |
ERR349264 | Sensitive | lineage4.9 | None |
ERR369156 | Sensitive | lineage4.9 | None |
ERR4769497 | Other | La1;lineage4.9 | None |
ERR4797313 | Sensitive | lineage2.2.1 | None |
ERR349330 | Sensitive | lineage4.9 | None |
ERR363446 | Sensitive | lineage4.9 | None |
SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None |
ERR4819809 | HR-TB | lineage4.6.2.2 | None |
ERR3445504 | Other | lineage4.9;lineage6.1.3 | None |
ERR926155 | Sensitive | lineage4.9 | None |
ERR4796577 | HR-TB | None | |
ERR926157 | Sensitive | lineage4.9 | None |
SRR1158918 | Sensitive | lineage4.9 | None |
ERR11082350 | MDR-TB | lineage4.6.2.2 | None |
ERR137286 | Other | lineage4.9 | None |
ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None |
ERR2513724 | Sensitive | lineage4.3.2.1 | None |
ERR3283040 | HR-TB | lineage4.9 | None |
ERR369162 | Other | lineage4.9 | None |
ERR3797029 | Other | lineage4.9 | None |
ERR4810624 | MDR-TB | lineage2.2 | None |
ERR4798823 | HR-TB | None | |
SRR3675580 | Sensitive | lineage4.9 | None |
ERR502511 | Sensitive | lineage4.9 | None |
SRR3675522 | Other | lineage4.9 | None |
ERR9119669 | HR-TB | lineage4.9 | None |
SRR5341400 | Sensitive | lineage4.9 | None |
SRR20969708 | HR-TB | lineage2.2 | None |
SRR6046577 | Other | lineage4.6.3;lineage4.9 | None |
ERR702405 | Sensitive | lineage4.9 | None |
ERR363506 | Sensitive | lineage4.9 | None |
ERR363490 | Sensitive | lineage4.9 | None |
ERR323107 | Sensitive | lineage4.9 | None |
SRR14801759 | HR-TB | La1.7;lineage4.9 | None |
SRR5341300 | HR-TB | lineage4.9 | None |
ERR363479 | Sensitive | lineage4.9 | None |
ERR369161 | Sensitive | lineage4.9 | None |
SRR3675473 | Sensitive | lineage4.9 | None |
SRR3675514 | Sensitive | lineage4.9 | None |
ERR323115 | Sensitive | lineage4.9 | None |
SRR6046492 | Other | lineage4.9 | None |
ERR13278785 | MDR-TB | lineage4.6.2.2 | None |
ERR4799025 | Other | lineage4.8 | None |
ERR1063857 | MDR-TB | La2;lineage4.9 | None |
ERR3283030 | HR-TB | lineage4.9 | None |
ERR373945 | Sensitive | lineage4.9 | None |
ERR3797015 | HR-TB | lineage4.9 | None |
ERR363437 | Sensitive | lineage4.9 | None |
ERR1063855 | Other | lineage4.9 | None |
SRR3675577 | Sensitive | lineage4.9 | None |
ERR1063883 | HR-TB | lineage4.9 | None |
SRR5341330 | Other | lineage4.9 | None |
ERR6865502 | Sensitive | lineage4 | None |
SRR6046897 | Sensitive | lineage4.9 | None |
SRR7240033 | Other | La1.2;La1.8.1 | None |
SRR14801749 | HR-TB | lineage4.9 | None |
SRR7496471 | Sensitive | lineage4 | None |
SRR5341461 | HR-TB | lineage4.9 | None |
ERR349299 | Other | lineage4.9 | None |
SRR6046245 | Other | lineage4.9 | None |
SRR10808805 | Other | La1;lineage4.9 | None |
ERR2041726 | MDR-TB | lineage4.1.2.1 | None |
ERR926163 | Other | lineage4.9 | None |
ERR751326 | Other | lineage4.9 | None |
SRR3675260 | Sensitive | lineage4.9 | None |
ERR926159 | Sensitive | lineage4.9 | None |
ERR363499 | Sensitive | lineage4.9 | None |
SRR14802079 | MDR-TB | lineage4.2.1 | None |
ERR245794 | HR-TB | lineage4.3.4.2.1 | None |
ERR3797073 | Other | La1.8.1 | None |
ERR4799378 | Sensitive | lineage4.9 | None |
ERR1035122 | Sensitive | lineage4.9 | None |
SRR12416842 | HR-TB | lineage4.9 | None |
ERR369160 | Sensitive | lineage4.9 | None |
ERR363445 | Other | lineage4.9 | None |
SRR14782405 | HR-TB | lineage4.9 | None |
SRR3675246 | Other | lineage4.9 | None |
SRR5341308 | Sensitive | lineage4.9 | None |
SRR5341298 | Sensitive | lineage4.9 | None |
SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None |
SRR12708416 | Sensitive | None | |
SRR10315551 | Sensitive | lineage2.2.1 | None |
SRR5341469 | HR-TB | lineage4.9 | None |
SRR5341456 | Other | lineage4.9 | None |
SRR20970016 | Other | lineage2.2 | None |
ERR3283025 | MDR-TB | La1.7;lineage4.9 | None |
ERR363456 | Sensitive | lineage4.9 | None |
SRR5341387 | Other | lineage4.9 | None |
ERR369159 | Sensitive | lineage4.9 | None |
ERR3445502 | Sensitive | lineage4.9;lineage7 | None |
SRR11462861 | Other | La1.8.1 | None |
SRR6046385 | Sensitive | lineage4.9 | None |
ERR2693252 | Sensitive | lineage4.9 | None |
SRR6045217 | Sensitive | lineage4.9 | None |
SRR6045503 | Sensitive | lineage4.9 | None |
SRR6046141 | Other | lineage4.9 | None |
ERR6866807 | Other | lineage4.9 | None |
ERR363500 | Sensitive | lineage4.9 | None |
SRR6045010 | Sensitive | lineage4.9 | None |
SRR6045832 | Other | lineage4.9 | None |
ERR323062 | Sensitive | lineage4.9 | None |
ERR4816113 | Sensitive | lineage4.1.1.1 | None |
SRR6046611 | Sensitive | lineage4.9 | None |
SRR5341373 | Other | lineage4.9 | None |
SRR9971114 | Other | lineage2.2.1 | None |
ERR736872 | HR-TB | lineage4.9 | None |
ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None |
ERR4811031 | Sensitive | lineage4.5 | None |
ERR369163 | Sensitive | lineage4.9 | None |
SRR3675265 | Other | lineage4 | None |
ERR502943 | Sensitive | lineage2.2.1;lineage4 | None |
SRR5535933 | Other | lineage4.9 | None |
ERR6358979 | Other | lineage4.9 | None |
ERR4817667 | HR-TB | lineage4.8 | None |
ERR323108 | HR-TB | La1.7;lineage4.9 | None |
SRR3675292 | Sensitive | lineage4.9 | None |
ERR4821686 | Sensitive | lineage4.1.2.1 | None |
ERR4178309 | Other | lineage4.1.2.1 | None |
ERR736848 | Other | lineage4.9 | None |
ERR176518 | Sensitive | lineage4.3.4.2.1 | None |
ERR6359066 | HR-TB | lineage4.9 | None |
SRR3675235 | Sensitive | lineage4.9 | None |
SRR5341345 | Sensitive | lineage4.9 | None |
ERR926160 | Sensitive | lineage4.9 | None |
ERR736856 | Sensitive | lineage4.9 | None |
SRR14782054 | Other | lineage4.9 | None |
ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None |
SRR3675548 | Sensitive | lineage4.9 | None |
ERR4797184 | Sensitive | lineage4.9 | None |
SRR29096174 | Sensitive | La1.7;lineage4.9 | None |
ERR926161 | Sensitive | lineage4.9 | None |
SRR6511621 | Sensitive | lineage4.9 | None |
ERR4814639 | HR-TB | lineage4.9 | None |
SRR1915481 | Other | La1.2.BCG;lineage4.9 | None |
SRR5341323 | Sensitive | lineage4.9 | None |
SRR20970043 | MDR-TB | lineage2.2.1 | None |
ERR485006 | HR-TB | lineage4.9 | None |
ERR11465279 | Sensitive | lineage4.3.4.1 | None |
ERR400336 | Sensitive | lineage4.9 | None |
ERR1023525 | HR-TB | La1.7;lineage4.9 | None |
ERR363509 | Sensitive | lineage4.9 | None |
ERR4596902 | MDR-TB | lineage3 | None |
ERR349298 | Sensitive | lineage4.9 | None |
SRR3675541 | Sensitive | lineage4.9 | None |
SRR3675387 | Other | lineage4.9 | None |
SRR5341453 | Other | lineage4.9 | None |
ERR971389 | Sensitive | lineage4.9 | None |
ERR11465232 | Sensitive | lineage4.1.2.1 | None |
ERR4812155 | Other | lineage4.9 | None |
ERR6866639 | Other | lineage4.9 | None |
SRR3675229 | Sensitive | lineage4.9 | None |
ERR133825 | HR-TB | La1;lineage4.9 | None |
ERR363502 | Other | lineage4.9 | None |
ERR8479578 | Sensitive | lineage1.1.3.1 | None |
SRR5341437 | Sensitive | lineage4.9 | None |
ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None |
ERR323056 | HR-TB | lineage4.4.1.2 | None |
SRR9970979 | Sensitive | lineage4.8 | None |
ERR473332 | Other | lineage4.9 | None |
SRR9970978 | Sensitive | La1;lineage4.1.2 | None |
SRR1172796 | Sensitive | lineage2.2.1.2 | None |
ERR2660539 | Other | lineage4.9 | None |
ERR373947 | Other | lineage4.9 | None |
SRR5341467 | Other | lineage4.9 | None |
SRR9971112 | Other | lineage2.2.1 | None |
ERR4815815 | Sensitive | lineage4.9 | None |
ERR349296 | Sensitive | lineage4.9 | None |
ERR2513283 | Sensitive | lineage5.1.4 | None |
ERR4024991 | Other | lineage4.8;lineage4.9 | None |
ERR736831 | Other | lineage4.9 | None |
ERR405209 | Sensitive | La1.7;lineage4.9 | None |
ERR926156 | Sensitive | lineage4.9 | None |
SRR19295647 | Sensitive | lineage4.9 | None |
ERR4797474 | Sensitive | lineage4.9 | None |
ERR6866022 | Other | lineage4.8;lineage4.9 | None |
SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None |
ERR926165 | Sensitive | lineage4.9 | None |
SRR3675477 | Sensitive | lineage4.9 | None |
ERR13285192 | Sensitive | lineage4.9 | None |
ERR4797350 | Sensitive | lineage1;lineage4.9 | None |
ERR2512770 | Sensitive | lineage4.2.1 | None |
SRR7535082 | Sensitive | lineage4.9 | None |
ERR4819314 | Other | lineage1.1.1 | None |
ERR4816762 | Sensitive | lineage4.9 | None |
SRR26399239 | Sensitive | lineage4.9 | None |
ERR323066 | Sensitive | lineage4.9 | None |
SRR6045359 | Sensitive | lineage4.9 | None |
ERR4811030 | Sensitive | lineage4.9 | None |
ERR363453 | Sensitive | lineage4.9 | None |
ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None |
SRR1175496 | Sensitive | lineage4.9 | None |
ERR1063896 | Sensitive | None | |
ERR369158 | Other | lineage4.9 | None |
ERR369151 | Other | lineage4.9 | None |
ERR363498 | Sensitive | lineage4.9 | None |
ERR400320 | Sensitive | lineage4.9 | None |
SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None |
ERR1063839 | MDR-TB | La2;lineage2.2 | None |
ERR4831620 | MDR-TB | lineage2.2.1 | None |
SRR1159378 | Other | lineage4.9 | None |
ERR4188247 | HR-TB | lineage4.9 | None |
SRR1792478 | HR-TB | La1.7.1 | None |
SRR9970980 | HR-TB | lineage4.1.2 | None |
SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None |
SRR5341310 | Other | lineage1.1.2 | None |
ERR6866410 | Sensitive | lineage4.9 | None |
SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None |
SRR20969731 | Other | lineage2.2.1 | None |
ERR926162 | Sensitive | lineage4.9 | None |
SRR6045548 | Sensitive | lineage4.9 | None |
SRR3675455 | Sensitive | lineage4.9 | None |
SRR3675279 | Sensitive | lineage4.9 | None |
ERR349300 | Sensitive | lineage4.9 | None |
ERR363421 | Sensitive | lineage4.9 | None |
ERR067712 | Sensitive | lineage4.9 | None |
SRR5341293 | Sensitive | lineage4.9 | None |
ERR4798099 | Other | lineage4.9 | None |
ERR4831616 | MDR-TB | lineage2.2.1 | None |
SRR10809074 | Sensitive | lineage4.9 | None |
SRR5341384 | HR-TB | lineage4.9 | None |
ERR502510 | Sensitive | lineage4.9 | None |
ERR4818561 | Sensitive | lineage4.9 | None |
ERR349265 | Other | lineage4.9 | None |
SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None |
SRR12708398 | Sensitive | lineage4.4.1.1 | None |
ERR4769521 | RR-TB | lineage4.9 | None |
SRR16156817 | Other | lineage4.9 | None |
SRR10315751 | MDR-TB | lineage4.8 | None |
ERR363426 | Sensitive | lineage4.9 | None |
ERR400345 | Other | lineage4.9 | None |
SRR5341366 | Sensitive | lineage4.9 | None |
ERR3797019 | Other | La1.8.1 | None |
ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4819051 | Sensitive | lineage4.9 | None |
ERR363449 | Sensitive | lineage4.9 | None |
ERR363474 | Sensitive | lineage4.9 | None |
ERR926158 | Sensitive | lineage4.9 | None |
ERR4178226 | Sensitive | lineage4 | None |
ERR4818252 | Sensitive | lineage4.1.1.2 | None |
SRR22424787 | Sensitive | lineage4.9 | None |
ERR4769450 | Other | lineage4.9 | None |
ERR4769474 | HR-TB | lineage4.9 | None |
ERR124636 | Sensitive | lineage4.9 | None |
ERR216938 | HR-TB | La1.7;lineage4.9 | None |
ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None |
SRR10315567 | HR-TB | lineage2.2.1 | None |
ERR6865513 | Other | lineage4.1.2.1 | None |
ERR1063846 | HR-TB | lineage4.9 | None |
SRR9970981 | RR-TB | lineage4.3.2.1 | None |