Rv3596c - c.1218G>C


Drug resistance types
126 Sensitive 10 RR-TB 85 HR-TB 16 MDR-TB 5 Pre-XDR-TB 2 XDR-TB 112 Other
lineage Counts
lineage Count
lineage4.4.2 1
lineage4.9 189
lineage4.2.1 2
La1;lineage4.9 3
lineage1.1.3.1 1
M.canetti;lineage4.9 5
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4.9 1
La1.7;M.canetti;lineage4.9 4
2
lineage3;lineage4.9 1
lineage4.8;lineage4.9 2
lineage2.2.1 19
lineage4.9;lineage7 5
lineage4.1.1.3;lineage4.9 1
lineage2.1;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.3.2.1 4
La1.7 2
lineage4.1.1.1 1
lineage4.1;lineage4.9 2
lineage3 4
lineage2.2 4
lineage4.2.1.1;lineage4.3.3 1
lineage4.3.3 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage4 8
lineage6.1.3 2
lineage2.2.1;lineage4 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.6.5 2
lineage4.1.2.1 6
lineage1.1.2 3
lineage4.8 2
La2;lineage4.9 1
lineage2.2.2 1
lineage1;lineage4.9 2
lineage4.4.1.1 1
La1.7;lineage3.1;lineage4 1
La3;lineage4.9 10
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7;lineage4.9 9
La1.2 1
lineage1.1.1;lineage4 1
M.canetti;lineage2.2 2
lineage4.9;lineage6.1.3 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.7;lineage4.9;lineage7 3
La1.8.1 1
lineage4.8.1 1
lineage4.1.1.2 1
La1.7.1;La1.7.X-unk4 1
La1.7.1;lineage4.9 1
lineage4.9;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.4.1.2 1
La1;lineage4.1.2 1
lineage2.2.1.2 2
lineage2.1;lineage4.9;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.2.BCG 1
lineage5.1.4 1
lineage1.1.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.2.1.2;lineage7 1
La1.7;lineage4.9;lineage6 1
lineage4.5 2
lineage4.3.4 1
lineage4.4.1.1.1 1
La3;lineage4 1
lineage4.1.2 1
La3;M.canetti;lineage4.9 1
lineage4.6.3;lineage4.9 1
lineage2.1;lineage4.9 1
lineage4.2.2.2 1
La1.2;La1.8.1 1
La1;lineage2;lineage4.9 1
lineage4.1.1.3 1
spoligotype Counts
spoligotype Count
None 356
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
DRR188519 Other lineage4.4.2 None
ERR363509 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR3675387 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR363502 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR4816656 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR3675441 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR373947 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR12708416 Sensitive None
SRR5341396 Other lineage3;lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR176778 HR-TB lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4819422 HR-TB lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046382 Sensitive lineage2.2.1 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
ERR323062 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR3283040 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
SRR10808668 Sensitive lineage2.2.1 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR363453 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
SRR28351347 Other lineage3 None
ERR4810624 MDR-TB lineage2.2 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR6044875 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR3275450 Other lineage4 None
SRR1238559 Other lineage4.9 None
ERR9787336 RR-TB lineage6.1.3 None
ERR363498 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR5535933 Other lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6045053 Other lineage4 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR7801175 HR-TB lineage4.6.5 None
ERR4820773 HR-TB lineage4.9 None
ERR7801176 RR-TB lineage4.6.5 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR5341310 Other lineage1.1.2 None
ERR6866410 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR13285068 Sensitive lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
SRR29772760 Pre-XDR-TB lineage2.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
ERR323115 Sensitive lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR5341345 Sensitive lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR373945 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR2514552 Sensitive lineage3 None
ERR4815441 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR6045371 Other lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR6198317 Other La1.2 None
ERR3797046 HR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR779852 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR9971112 Other lineage2.2.1 None
ERR3283018 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR4797264 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR349296 Sensitive lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR2517475 Other lineage4 None
ERR3283055 HR-TB lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR28119827 Other La3;lineage4.9 None
SRR16156804 Sensitive lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR4796254 Sensitive lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4819241 Other lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4769439 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR29096882 Sensitive lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR1175496 Sensitive lineage4.9 None
SRR29772570 Other lineage4.9 None
ERR1063896 Sensitive None
ERR387051 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675580 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR1062919 HR-TB lineage2.2.1 None
SRR3675265 Other lineage4 None
SRR12708384 Sensitive lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR1791747 Other La1.8.1 None
SRR6046046 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR363490 Sensitive lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR108125 RR-TB lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
SRR3675235 Sensitive lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR9787256 Other lineage6.1.3 None
SRR5341384 HR-TB lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR6046593 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR4797184 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR10315567 HR-TB lineage2.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR6865513 Other lineage4.1.2.1 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6511621 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR2446382 Other lineage4 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR5341453 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1063849 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR4797193 HR-TB lineage1.1.2 None
ERR473332 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR176751 Other lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR363447 Other lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR1238558 Other lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
ERR245675 Sensitive lineage1.1.2 None
ERR4798262 HR-TB La1.2.BCG None
SRR6045233 Other M.canetti;lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR14066533 Sensitive lineage1.1.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
SRR3675547 Sensitive lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6046878 Other lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR400529 Other lineage3 None
ERR137286 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR752229 Other lineage4.5 None
ERR4818929 HR-TB lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
SRR6046611 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR3675270 Other lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR1175127 Other lineage2.2.1.2 None
ERR736817 HR-TB lineage4.3.4 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR3283028 Other La3;lineage4 None
SRR1159378 Other lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341296 Sensitive lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR20969731 Other lineage2.2.1 None
SRR6045548 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR4830353 Other La1.7 None
SRR5341425 Other lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR6046897 Sensitive lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR4814396 Sensitive lineage4.1.1.3 None
ERR1063846 HR-TB lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR176779 HR-TB lineage4.9 None