Rv0667 - c.3421C>T


Drug resistance types
3 Sensitive 4 RR-TB 33 HR-TB 11 MDR-TB 4 Pre-XDR-TB 3 XDR-TB 123 Other
lineage Counts
lineage Count
La3 2
M.canetti;lineage2.1;lineage4.9 2
La3;lineage4.8 2
lineage2.1;lineage4.9 14
lineage2.1;lineage4.9;lineage6.3 10
lineage4.9 36
lineage4.8 6
lineage1.2.2.2 1
La3;lineage2.1;lineage4.9 2
lineage4.6.3;lineage4.9;lineage6.3 1
lineage3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 2
lineage4.1.2.1 9
18
lineage2.2.1 11
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage1.1.2 1
lineage2.2 4
lineage2.1 3
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 6
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.2.1;lineage6.3 1
lineage4.3.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.1.3 2
lineage2.2.1.2 2
lineage4.9;lineage7 3
M.canetti;lineage2.1;lineage6.3 1
lineage4.6.2.2 1
lineage4.3.4.2.1 1
lineage4.1.1.1 3
lineage4.5 1
La3;lineage2.1;lineage6.3 1
lineage2.1;lineage6.3 2
lineage2.1;lineage4.9;lineage7 1
lineage6.3.1 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.9 1
La3;lineage1.1.2 1
La1.2.BCG;La1.8.1 1
lineage2.2.1;lineage3 1
lineage4 2
lineage3.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage3.1.1 1
lineage2.2.1.2;lineage7 1
lineage4.3.4.1 1
lineage5.2 2
La3;lineage2 1
La3;lineage2.2.1 1
lineage6.1.3 1
lineage2.2.2 1
lineage1.1;lineage4 1
M.canetti;lineage4.9 1
spoligotype Counts
spoligotype Count
None 181
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3797046 HR-TB lineage4.9 None
ERR11081258 Other lineage4.8 None
ERR4797201 Other lineage1.2.2.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR1172817 Other La3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR7131023 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786444 Sensitive lineage4.8 None
SRR3675275 Other lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR6046046 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4817735 Other lineage4.8 None
SRR1196677 Other lineage2.2 None
ERR9786569 Other lineage4.8 None
SRR6046141 Other lineage4.9 None
ERR702406 Other lineage2.1 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR6045347 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6785263 Sensitive lineage2.2.1 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR21732980 Other lineage4.3.3 None
ERR4814352 Other lineage2.2.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786694 Other lineage4.1.2.1 None
SRR3675457 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR11662690 HR-TB lineage4.9 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786617 Other lineage4.1.1.1 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR9786642 Other lineage4.1.2.1 None
SRR7496509 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR4815604 Other None
ERR9117709 Other None
ERR234659 HR-TB None
ERR2514692 Other None
SRR18213713 HR-TB None
SRR25827682 Other None
ERR9787197 Other None
SRR3675236 Other None
ERR4816999 Other None
SRR28119777 Other lineage4.9 None
ERR752229 Other lineage4.5 None
SRR1196583 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
SRR5341330 Other lineage4.9 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR9787139 Other lineage6.3.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR6045217 Other lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
SRR1173355 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4817896 HR-TB lineage2.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR387051 RR-TB lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR1196474 Other lineage3.1.1 None
ERR4799513 HR-TB lineage2.2 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR3675221 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR11049020 Other lineage4.8 None
ERR9119500 MDR-TB lineage5.2 None
SRR1172234 Other lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR1196546 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR9787165 Other lineage6.1.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
SRR6045053 Other lineage4 None
SRR1184372 MDR-TB None
SRR6789626 Other None
SRR1172857 Other None
SRR7496517 Other None
ERR4407463 HR-TB None
SRR28119805 Other lineage4.9 None
ERR4817060 Other None
SRR1175127 Other lineage2.2.1.2 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR6046878 Other lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1173633 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR4819322 Other lineage1.1;lineage4 None
ERR176741 Other lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR1173118 Other lineage2.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR176793 Other lineage4.1.1.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR1165699 Other lineage4.9 None