Rv0701 - c.420T>C
Drug resistance types
15 Sensitive
2 RR-TB
128 HR-TB
5 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| 113 | |
| lineage4.3.2 | 1 |
| lineage4 | 13 |
| lineage4.3.4 | 2 |
| lineage6.1.3 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.1.2.1 | 4 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage2 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.9 | 20 |
| lineage2.2.1 | 10 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.5 | 1 |
| lineage1.2.1.2 | 1 |
| lineage3 | 4 |
| lineage2.2 | 5 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage4.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| La2 | 1 |
| La1.8.1 | 1 |
| La1.2 | 1 |
| La1 | 1 |
| lineage3.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 202 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4811493 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR6866410 | Sensitive | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR987722 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9119669 | HR-TB | None | ERR9634265 | Sensitive | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR069989 | HR-TB | lineage2 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1174897 | HR-TB | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR14801749 | Sensitive | None | SRR13861322 | Other | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861566 | Other | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR1640750 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675486 | HR-TB | None | SRR2101605 | Sensitive | lineage2.2.1 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR1035239 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | SRR6325445 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR161033 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675222 | Other | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR181744 | HR-TB | None | SRR3675234 | Other | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675555 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR176751 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675383 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675545 | HR-TB | None | ERR212123 | Other | None | SRR3675558 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4816466 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4818929 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR2229143 | Other | lineage4.1.1 | None | ERR163965 | Sensitive | lineage4.3.4.2.1 | mw | ERR1035138 | MDR-TB | None | ERR2515471 | HR-TB | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR2514692 | Other | None | SRR5341456 | Other | None | SRR5341330 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR5341470 | HR-TB | None | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693239 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045519 | HR-TB | None | SRR6045892 | Sensitive | None | SRR5535933 | HR-TB | None | ERR278594 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6046046 | Other | None | SRR6045327 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR2517528 | Other | lineage3 | nl | ERR4830353 | Other | None | SRR6046492 | Other | None | SRR6325448 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR8217918 | HR-TB | None | SRR6896518 | HR-TB | lineage4.9 | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502524 | HR-TB | La2 | None | ERR5311081 | HR-TB | None | ERR1063859 | HR-TB | None | ERR323038 | HR-TB | None | ERR323045 | HR-TB | None | ERR323053 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283017 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3283024 | Other | None | ERR3283025 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797044 | Other | None | ERR3797046 | HR-TB | None | ERR3797061 | Other | None | ERR387051 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3797082 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR4769450 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4188350 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4769521 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4810624 | HR-TB | lineage2.2 | None |
|---|
