Rv3596c - c.144A>G


Drug resistance types
65 Sensitive 38 RR-TB 128 HR-TB 129 MDR-TB 6 Pre-XDR-TB 2 XDR-TB 170 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 16
La1.2 1
lineage4.8;lineage4.9 2
M.canetti;lineage2.1;lineage4.9 26
M.canetti;lineage2.1;lineage4 1
lineage4.9 175
lineage2.1;lineage4.9;lineage6.3 11
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.1;lineage6.3 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.7.1 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
M.canetti;lineage4.2;lineage4.9 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage4.9;lineage7 4
lineage2.2.1 23
lineage4.1.2.1 8
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.3 6
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.1 3
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.9;lineage9 3
lineage2.2.1;lineage6.3 1
La1.7;M.canetti;lineage4.9 4
lineage4 10
M.canetti;lineage4.9 4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.5 2
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage3 5
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage2.2.1.2;lineage7 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La2;lineage4.9;lineage9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.7.1;lineage4.9 1
La1.7;lineage4.9;lineage7 2
La2;lineage4.9 2
lineage4.2.1 1
lineage4.1.1.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;lineage4.9 11
lineage2.2.1.2 2
lineage2.2.1.1 4
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage6.1.3 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.2 1
lineage4.1;lineage4.9 2
lineage4.1.1.2 1
lineage4.3.4 1
lineage2.1;lineage2.2;lineage6.3 1
lineage4.4.1.1.1 1
La3;lineage2.1;lineage4.9 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.3.4.2.1 3
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La2;lineage2.2 1
La1.7.X-unk4;lineage4.9 1
lineage2.2.2 1
lineage2.2.1;lineage4 2
lineage4.8 4
La3;lineage1.1.2 1
lineage4.1.2 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9 11
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.9 2
La1.2;La1.8.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage1;lineage4.9 2
lineage3.1.2.2 1
La1.7.1;La1.7.X-unk4 1
lineage4.3.2.1 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.7;lineage4.9 5
lineage4.4.1.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage6.3 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.1.3 2
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1;lineage4.1.2 1
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1.1;lineage4 1
La3;M.canetti;lineage3.1 1
lineage5.1.4 1
M.canetti;lineage4.9;lineage9 1
lineage1.1.2 2
lineage4.2;lineage4.9 3
lineage6.3.1 1
La3;M.canetti;lineage2.2.1 1
lineage6.1.1 2
La1.6;La3;M.canetti;lineage4.2.2 1
lineage1.2.2.2 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.8.1 1
lineage2.2 4
lineage4.6.3;lineage4.9 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 1
La1;lineage2;lineage4.9 1
La1.2.BCG;La1.8.1 1
lineage2.2.1;lineage3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
M.canetti;lineage1 1
La1;lineage4.9 3
lineage4.1.1.1 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.3.3 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage2 1
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage3;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage1.1.3.1 1
18
La1.7;lineage4.9;lineage6 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2 1
lineage1.1 1
lineage4.1.1.3;lineage4.9 2
lineage4.6.2.2 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.4.2 1
La1.6;lineage4 1
lineage3.1;lineage9 1
La3;M.canetti;lineage4.9 1
La3;lineage2.1;lineage6.3 1
lineage4.2.1.1;lineage4.3.3 1
La1.2.BCG 1
lineage2.1;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 538
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1184380 Other lineage2.1;lineage4.9 None
SRR23961549 Other La1.2 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR369157 Sensitive lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR926165 Other lineage4.9 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797015 HR-TB lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR3675455 Sensitive lineage4.9 None
ERR387051 RR-TB lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR3675214 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR3675210 Sensitive lineage4.9 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046897 Sensitive lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR4811031 Other lineage4.5 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR400336 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1063849 HR-TB lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR400326 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR2514552 Sensitive lineage3 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323062 HR-TB lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4769474 HR-TB lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1175513 Sensitive lineage4.9 None
ERR4796254 Other lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4819877 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR12708384 Sensitive lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR3675541 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR3675387 Other lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR4814396 Sensitive lineage4.1.1.3 None
SRR12416842 HR-TB lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR3797047 MDR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR1165628 Other La3;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR9787165 Other lineage6.1.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR23961559 Other La1.7;lineage4.2 None
ERR502510 HR-TB lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4818252 HR-TB lineage4.1.1.2 None
SRR3675507 RR-TB lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046046 Other lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR3275450 Other lineage4 None
SRR10808668 Other lineage2.2.1 None
ERR2693252 HR-TB lineage4.9 None
ERR702405 HR-TB lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675270 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR1159378 Other lineage4.9 None
SRR6045217 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR6046878 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR15014682 MDR-TB lineage4.8 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4798504 RR-TB lineage3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR4820773 HR-TB lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR702406 Other lineage2.1 None
ERR926156 Other lineage4.9 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR26159043 Other lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR323066 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3283032 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
SRR5341323 Sensitive lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446566 Other lineage4.9 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR736831 Other lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1181091 Other lineage2.2.1.1 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926164 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR6044815 RR-TB lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR4816656 Other lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
ERR473332 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675547 Sensitive lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR1158918 Other lineage4.9 None
ERR369156 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR3468607 RR-TB lineage4.9 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926155 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR2513283 Sensitive lineage5.1.4 None
SRR11662690 HR-TB lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811493 HR-TB lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR1175127 Other lineage2.2.1.2 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR5341330 Other lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR369151 Other lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR9787014 RR-TB lineage6.1.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR10225404 Sensitive lineage1.2.2.2 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4188247 HR-TB lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6866639 HR-TB lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR3283031 Other La3;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1180226 HR-TB lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR6045548 Other lineage4.9 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399239 Sensitive lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR5341345 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR17832802 HR-TB lineage3 None
ERR2027263 Other lineage4 None
SRR10315751 MDR-TB lineage4.8 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR3799304 RR-TB lineage6.1.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR124636 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR1063846 HR-TB lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR10808805 Other La1;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4817731 HR-TB lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR3797064 Other La3;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR14782405 HR-TB lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR4178226 Sensitive lineage4 None
SRR3675457 Other lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4797184 HR-TB lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR3283040 HR-TB lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2446382 Other lineage4 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341396 Other lineage3;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR736834 HR-TB lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR3283021 MDR-TB lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR363456 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR1063896 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
SRR1640750 RR-TB None
SRR6789626 Other None
SRR18213713 HR-TB None
ERR987722 MDR-TB None
ERR4407463 HR-TB None
SRR28119805 Other lineage4.9 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR6358979 HR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR9786639 Sensitive lineage4.8 None
ERR4769497 Other La1;lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR176651 Other lineage4.9 None
ERR373945 Other lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR3275196 RR-TB lineage2.2.1 nl
SRR1183144 RR-TB lineage2.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR6359082 Other lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786682 Other lineage4.1.2.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR502511 HR-TB lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR3797080 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
SRR7496509 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786671 Other None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
SRR1184372 MDR-TB None
SRR28351339 MDR-TB lineage4 None
ERR212001 HR-TB None
SRR28351554 Other La1.6;lineage4 None
SRR28119777 Other lineage4.9 None
SRR6045795 Other lineage2.2.1 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR6866807 RR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675502 Sensitive lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR971389 Other lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786843 Other None
ERR9117709 Other None
ERR234659 HR-TB None
SRR25827682 Other None
ERR9787197 Other None
SRR3675236 Other None
SRR12708416 Sensitive None
ERR752229 Other lineage4.5 None
ERR3797029 Other lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4797474 Other lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6046611 Sensitive lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None