Rv3596c - c.780C>G
Drug resistance types
4 Sensitive
4 RR-TB
29 HR-TB
11 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 25 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1 | 7 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2.1 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage2.2.1.2 | 2 |
| La1.7;lineage4.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.6.1.2 | 4 |
| La3;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2 | 2 |
| La1.7;lineage4.9 | 2 |
| La3;lineage4.3.4 | 1 |
| lineage2.2.2 | 1 |
| lineage1.2.2.2 | 1 |
| La1;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.8 | 2 |
| lineage4.3.3 | 1 |
| 1 | |
| La2;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage6.1.2 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage3 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 72 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5535933 | Other | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4798898 | MDR-TB | lineage3.1.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR2432997 | Other | lineage4.8 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4796577 | HR-TB | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR161037 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR1238559 | Other | lineage4.9 | None |
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