Rv0667 - c.1245G>C
Drug resistance types
44 Sensitive
64 RR-TB
70 HR-TB
34 MDR-TB
17 Pre-XDR-TB
1 XDR-TB
61 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.7 | 5 |
| 57 | |
| lineage2.2.1 | 25 |
| lineage3.1.2.1 | 2 |
| lineage4.9 | 68 |
| lineage4;lineage2 | 1 |
| lineage4.8 | 12 |
| lineage4.1.2.1 | 6 |
| lineage4.1 | 2 |
| lineage3 | 21 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2 | 4 |
| lineage4 | 20 |
| lineage4.1.1.3.1 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4.4.1.1 | 4 |
| lineage1.1.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.8.2 | 1 |
| La1.8.1 | 5 |
| lineage4.3.1 | 1 |
| lineage4.3.3 | 3 |
| lineage4.2.1.1 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.2.1 | 5 |
| lineage4.8.1 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| La1.2 | 1 |
| La1 | 1 |
| lineage2.2 | 6 |
| lineage4.3.2.1 | 1 |
| lineage4.5 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.4 | 1 |
| lineage4.8;lineage4.3.3 | 3 |
| lineage4.6.1.2 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage2.2.1.2 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.4 | 1 |
| lineage4.4.2;lineage4.2.2;lineage2.2.1 | 1 |
| lineage4.4.2 | 2 |
| lineage3.1.3 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.2.2 | 1 |
| lineage4.3.4 | 1 |
| lineage1.2.1.1 | 2 |
| lineage5 | 1 |
| lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 291 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4817189 | Other | lineage4.7 | None | ERR4816690 | Other | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR1035162 | Other | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR2446566 | Other | lineage4.1 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818393 | RR-TB | lineage3 | None | ERR2432997 | Other | lineage4.8 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818561 | HR-TB | lineage4 | None | ERR2509885 | RR-TB | lineage3 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4818536 | Other | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819528 | RR-TB | lineage3 | None | SRR5341456 | Other | None | ERR4819462 | Other | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341418 | Other | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SRR5341330 | HR-TB | None | ERR2514771 | RR-TB | lineage4.8.2 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR2514514 | RR-TB | lineage3 | gb | ERR6359082 | Other | lineage4.9 | None | ERR4820151 | RR-TB | lineage4.8 | None | SRR5431730 | Other | La1.8.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR5535933 | HR-TB | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4822104 | RR-TB | lineage3 | None | ERR4821276 | Other | lineage3 | None | ERR2693227 | Other | lineage4.9 | None | ERR4821712 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045053 | Other | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045892 | Sensitive | None | SRR6045217 | Other | lineage4 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046046 | Other | None | SRR6046225 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR323037 | HR-TB | lineage4 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | SRR6046594 | HR-TB | lineage4 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502889 | Other | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR017781 | Other | lineage3 | None | ERR067681 | HR-TB | None | ERR1034652 | Other | None | ERR1063855 | Other | lineage4 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR3445501 | HR-TB | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR133986 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR387051 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR403298 | HR-TB | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769442 | HR-TB | lineage4 | None | ERR4798406 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4798262 | HR-TB | La1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4811493 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6197033 | Other | lineage4.7 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR6197031 | Other | lineage4.7 | None | ERR6197039 | MDR-TB | lineage4.3.4.2 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736839 | Other | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR752229 | Other | lineage4.5 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9901813 | RR-TB | lineage4.1.4 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173310 | MDR-TB | None | SRR1173740 | Other | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR16156832 | RR-TB | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18002873 | Pre-XDR-TB | lineage4.4.2;lineage4.2.2;lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18572454 | RR-TB | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR3675230 | RR-TB | lineage3 | None | ERR158583 | HR-TB | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR181744 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | SRR3675502 | Other | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4815394 | RR-TB | lineage4.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4814841 | Other | lineage4.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR1750907 | RR-TB | None | SRR3675270 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR4816151 | Other | lineage4.8 | None | SRR3675456 | HR-TB | None | ERR4816982 | Other | lineage4 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR4815079 | RR-TB | lineage3 | None | ERR4816964 | Other | lineage4.9 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4816967 | RR-TB | lineage5 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816183 | Other | None | SRR3675550 | Other | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4817367 | Sensitive | lineage4.9 | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | None | ERR4817131 | Pre-XDR-TB | None |
|---|
