Rv0667 - c.1245G>C


Drug resistance types
45 Sensitive 45 RR-TB 39 HR-TB 41 MDR-TB 9 Pre-XDR-TB 1 XDR-TB 55 Other
lineage Counts
lineage Count
lineage4.9;lineage7 5
lineage4.9 82
lineage2.2.1 20
lineage2.2 3
M.canetti;lineage4.2;lineage4.9 1
lineage1.1.1 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.8 15
lineage4.4 1
lineage4 3
lineage4.9;lineage6.1.3 1
lineage4.6.3;lineage4.9 2
lineage4.1.2.1 3
lineage4.1.1.1 2
lineage4.2.1 5
lineage4.3.1;lineage4.9;lineage6 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.4.1.1.1 3
lineage4.9;lineage9 1
lineage3.1.1 2
lineage3 5
La1.2.BCG 1
lineage4.8.1 2
La1.7;lineage4.9 2
lineage1.2.1.1 2
lineage2.2.1.2 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.4.1.1 3
M.canetti;lineage4.6.4;lineage4.9 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.9;lineage6.3 1
lineage4.3.2.1 3
M.canetti;lineage4.9 1
lineage2.1;lineage4.9 1
lineage4.1.1.3 2
lineage4.4.2 1
lineage4.3.4.2 1
La3;lineage4.3.4 1
lineage4.7 1
lineage4.6.1.1 2
lineage1.2.2.2 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;lineage4.9 1
La1.8.1 3
lineage4.6.4;lineage4.9 1
lineage4.1.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.9.1 1
lineage4.3.3 2
lineage2.2.1;lineage4.9 2
M.canetti;lineage4.2 1
lineage2.2.1.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage1.1.3.1 1
lineage4.5 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage3.1.2.1 1
lineage4.2.2.2 1
lineage4.3.3;lineage4.8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4 1
lineage4.3.4.2.1 1
lineage2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2.2.1.2;lineage7 1
lineage2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.3.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.4.1.2 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage6.1.3 1
lineage4.6.1.2 1
lineage4.1.1.3.1 1
1
La1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 235
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR1180375 Sensitive lineage4.9 None
SRR6045217 Other lineage4.9 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR3283055 HR-TB lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR1181402 Sensitive lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4819314 HR-TB lineage1.1.1 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR1175487 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
ERR1063855 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR1181349 Sensitive lineage4 None
SRR1180312 Sensitive lineage4.9 None
SRR15315797 RR-TB lineage2.2.1 None
SRR6045219 HR-TB lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
SRR1172807 Sensitive lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR4818259 RR-TB lineage4.1.1.1 None
ERR2446566 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR1175512 Sensitive lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR502470 RR-TB lineage4.9 None
SRR1173310 Other lineage3.1.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR6045359 HR-TB lineage4.9 None
SRR6045053 Other lineage4 None
SRR1180406 Sensitive lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR11342662 MDR-TB lineage4.8.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR978755 RR-TB lineage4.8 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR1175127 Other lineage2.2.1.2 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR1180345 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR6046046 Other lineage4.9 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR6046492 Other lineage4.9 None
SRR6832249 Sensitive lineage2.2.1 None
SRR6046878 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR1140724 Other lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
ERR4816466 HR-TB lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR4814734 Other lineage1.2.1.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR387051 RR-TB lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR6045548 Other lineage4.9 None
SRR26399239 Sensitive lineage4.9 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR20969542 Other lineage4.4.2 None
ERR4829816 RR-TB lineage4.4.1.1 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR7645928 Other lineage4.7 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR3675582 Other lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR7645899 Other lineage2.2.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR181744 HR-TB La3;lineage4.9 None
SRR5431730 Other La1.8.1 None
SRR1183054 Sensitive lineage4.9 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR18572454 RR-TB lineage4.9 None
ERR4819546 HR-TB lineage3 None
SRR1180444 Sensitive lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR11342658 RR-TB lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR1180399 Sensitive lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
SRR1184329 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR4769452 Other lineage4.9 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR11465189 RR-TB lineage4.9.1 None
ERR4769450 Other lineage4.9 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6359082 Other lineage4.9 None
SRR6046594 Other lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR1735598 RR-TB lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR4769442 Sensitive lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR10762297 MDR-TB lineage4.2.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SAMEA3501065 RR-TB lineage4.8 None
ERR752229 Other lineage4.5 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR978733 RR-TB lineage4.8 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR1180420 Sensitive lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR5535933 Other lineage4.9 None
ERR2513830 RR-TB lineage4.8 None
ERR4816717 RR-TB lineage3.1.2.1 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR6832787 Other lineage2.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR14782539 MDR-TB lineage4.2.1 None
ERR216965 Sensitive lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR9971150 RR-TB lineage4.8.1 None
ERR4769439 HR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR6046593 Other lineage4.9 None
ERR4819528 RR-TB lineage3 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR12708414 HR-TB lineage2.2.1 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR6359066 HR-TB lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675280 RR-TB lineage4.9 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR5311077 Other La1.8.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR1180319 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4829039 RR-TB lineage4.3.1 None
SRR1172717 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR6358951 Sensitive lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR3468488 Other La1.8.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR3797062 RR-TB lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
ERR4820410 RR-TB lineage3.1.1 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3797047 MDR-TB lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR4821276 Sensitive lineage3 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1180391 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR978734 RR-TB lineage4.8 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR1023236 Other lineage6.1.3 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1180413 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SAMEA3501070 RR-TB lineage4.8 None
SRR6046485 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR161037 HR-TB lineage4.9 None
SRR7070157 Other lineage4.1.1.3.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR4796577 HR-TB None
ERR4769497 Other La1;lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
SRR5341330 Other lineage4.9 None