Rv0667 - c.1245G>C
Drug resistance types
45 Sensitive
45 RR-TB
39 HR-TB
41 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
55 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 2 |
| lineage4.1.1.1 | 2 |
| lineage4.9 | 82 |
| lineage4.8 | 15 |
| lineage4.2.1 | 5 |
| lineage4.3.3 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.8.1 | 3 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1 | 20 |
| M.canetti;lineage4.2 | 1 |
| lineage2.2.1.1 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4 | 3 |
| lineage4.6.3;lineage4.9 | 2 |
| 1 | |
| lineage4.5 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.8.1 | 2 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage1.2.1.1 | 2 |
| lineage2.2.1.2 | 2 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage2.2 | 3 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.1.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.4.1.1 | 3 |
| lineage1.2.2.2 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.9;lineage7 | 5 |
| La3;lineage4.9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage3 | 5 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.4.1.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage4.1.2 | 1 |
| lineage3.1.1 | 2 |
| lineage2.2.1;lineage4.9 | 2 |
| La1;lineage4.9 | 1 |
| La1.2.BCG | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.3;lineage4.8 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.4 | 1 |
| lineage4.4.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage4.7 | 1 |
| lineage2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.1 | 1 |
| lineage4.3.2.1 | 3 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage6.1.3 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage1.1.3.1 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 235 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675280 | RR-TB | lineage4.9 | None | ERR4818259 | RR-TB | lineage4.1.1.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR5311077 | Other | La1.8.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | SRR6045053 | Other | lineage4 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR4796577 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR6046046 | Other | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046492 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR3675446 | RR-TB | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4818536 | Other | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR1063855 | Other | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR2446566 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR5431730 | Other | La1.8.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR3468488 | Other | La1.8.1 | None | ERR4819546 | HR-TB | lineage3 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR4821276 | Sensitive | lineage3 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR6046594 | Other | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR5535933 | Other | lineage4.9 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR3675390 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4819528 | RR-TB | lineage3 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR7645928 | Other | lineage4.7 | None | SRR3675582 | Other | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | SRR18572454 | RR-TB | lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR4769452 | Other | lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR20970016 | Other | lineage2.2 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR5341330 | Other | lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR3439432 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR6832249 | Sensitive | lineage2.2.1 | None | SRR6046878 | Other | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR1140724 | Other | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR6832787 | Other | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045548 | Other | lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR3675586 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None |
|---|
