lineage | Count |
---|---|
lineage4.3.2;lineage4.9 | 1 |
lineage4.9;lineage6.3 | 2 |
lineage4.2;lineage4.9 | 3 |
lineage3.1.2.1;lineage3.1.2.2 | 1 |
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
La2;lineage4.9 | 1 |
lineage4.9;lineage9 | 2 |
lineage4.9 | 15 |
lineage4.3.4.2.1 | 1 |
lineage5.2 | 2 |
lineage4.9;lineage7 | 1 |
lineage4.2;lineage4.8.1;lineage4.9 | 2 |
lineage2.2.1 | 3 |
La1.7;lineage4.9 | 2 |
M.canetti;lineage2.2 | 2 |
lineage3.1.2.1;lineage4 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
lineage2.2.1.2 | 2 |
La1.7.X-unk4;lineage4.9 | 1 |
lineage3.1.2.2 | 1 |
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
lineage2.2.1.1 | 2 |
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
La3;lineage4.9 | 1 |
lineage2.2.1.2;lineage7 | 1 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
lineage2.1;lineage4.9 | 1 |
La3;lineage4.3.4 | 1 |
lineage2.1;lineage4.1.4;lineage4.9 | 1 |
La2;lineage4.9;lineage9 | 1 |
lineage2.2 | 1 |
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
1 |
spoligotype | Count |
---|---|
None | 60 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None |
ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None |
ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None |
SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
ERR323039 | HR-TB | La2;lineage4.9 | None |
SRR1174897 | MDR-TB | lineage4.9;lineage9 | None |
SRR29050859 | Other | lineage4.9 | None |
SRR6045219 | HR-TB | lineage4.9 | None |
ERR11465015 | Sensitive | lineage4.3.4.2.1 | None |
ERR4872094 | MDR-TB | lineage5.2 | None |
SRR8217918 | HR-TB | lineage4.9 | None |
ERR176751 | Other | lineage4.9 | None |
ERR4831117 | HR-TB | lineage4.9;lineage7 | None |
SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
SRR1183144 | Other | lineage2.2.1 | None |
SRR11662690 | HR-TB | lineage4.9 | None |
ERR212034 | HR-TB | La1.7;lineage4.9 | None |
ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None |
ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None |
SRR28351455 | Other | lineage3.1.2.1;lineage4 | None |
SRR29096410 | Other | lineage4.9 | None |
SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
SRR1175127 | Other | lineage2.2.1.2 | None |
SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None |
ERR212123 | Other | lineage4.9 | None |
ERR4798648 | MDR-TB | lineage3.1.2.2 | None |
ERR161037 | Other | lineage4.9 | None |
SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None |
SRR1180172 | Other | lineage2.2.1 | None |
SRR1183106 | RR-TB | lineage2.2.1.1 | None |
SRR6046485 | Other | lineage4.9 | None |
SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None |
ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None |
SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None |
SRR1180226 | HR-TB | lineage4.9 | None |
SRR6045555 | Other | lineage4.9 | None |
ERR181744 | HR-TB | La3;lineage4.9 | None |
SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None |
ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None |
SRR1172310 | HR-TB | lineage4.9 | None |
SRR12142339 | HR-TB | lineage2.2.1 | None |
ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None |
SRR6046133 | HR-TB | lineage4.9 | None |
ERR161039 | HR-TB | La3;lineage4.3.4 | None |
SRR5341470 | MDR-TB | lineage4.9;lineage9 | None |
ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None |
ERR212121 | HR-TB | lineage4.9;lineage6.3 | None |
ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None |
SRR6046594 | Sensitive | lineage4.9 | None |
SRR1172796 | Sensitive | lineage2.2.1.2 | None |
ERR4799513 | HR-TB | lineage2.2 | None |
SRR1183111 | HR-TB | lineage4.9 | None |
ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
SRR1180147 | Other | lineage2.2.1.1 | None |
ERR176560 | HR-TB | La1.7;lineage4.9 | None |
ERR9119500 | MDR-TB | lineage5.2 | None |
ERR987722 | MDR-TB | None |