lineage | Count |
---|---|
lineage4.3.4 | 1 |
34 | |
lineage4.1 | 1 |
lineage4.9 | 2 |
lineage2.2.1 | 5 |
La3 | 1 |
lineage4 | 1 |
lineage5.2 | 2 |
lineage2.2 | 3 |
La2 | 1 |
lineage4.3.4.2.1 | 1 |
La1.2 | 1 |
La1 | 1 |
lineage3.1.2 | 1 |
lineage4.3.4.1 | 1 |
lineage1.1.2 | 1 |
lineage2.2.1.2 | 2 |
lineage2.2.1.1 | 2 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage7;lineage2.2.1.2 | 1 |
spoligotype | Count |
---|---|
None | 63 |
ID | Drug resistance | Lineage | Country iso2 | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | ERR176751 | HR-TB | None | ERR176740 | HR-TB | None | ERR212121 | HR-TB | None | ERR212034 | HR-TB | None | ERR212123 | Other | None | SRR3675571 | HR-TB | None | SRR5341470 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046133 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045604 | Sensitive | La3 | None | SRR6046460 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR8217918 | HR-TB | None | ERR4810691 | Sensitive | lineage2.2.1 | cn | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831117 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR3797036 | HR-TB | None | ERR1063857 | HR-TB | None | ERR3797046 | HR-TB | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR11465015 | Sensitive | lineage4.3.4.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR6359045 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6358991 | HR-TB | None | ERR9119669 | HR-TB | None | ERR736865 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR987722 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR9901856 | HR-TB | lineage1.1.2 | None | SRR1172310 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1174897 | HR-TB | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR14782405 | HR-TB | None |
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