lineage | Count |
---|---|
58 | |
lineage3.1 | 2 |
lineage4.3.4.2.1 | 1 |
lineage4.1.2.1 | 9 |
La1 | 1 |
lineage4.3.4.1;La1.7 | 1 |
lineage4 | 16 |
lineage4.9 | 14 |
La1.8.1 | 2 |
lineage4;lineage3.1 | 1 |
lineage4.3.3 | 3 |
lineage4.3.4 | 1 |
lineage4.1.2.1.1 | 1 |
lineage4.3.2 | 1 |
lineage2.2.2 | 1 |
lineage2.2.1.2 | 2 |
lineage4.4.1.1 | 2 |
lineage4.5 | 1 |
lineage2.2.1 | 6 |
lineage4;lineage2.2 | 1 |
lineage4.1 | 1 |
lineage3;lineage2.1 | 1 |
lineage2.1 | 1 |
lineage4;lineage1.1.2 | 1 |
lineage4.1.1.3 | 1 |
lineage4.1.1 | 1 |
lineage3 | 2 |
lineage1.1 | 1 |
spoligotype | Count |
---|---|
None | 133 |
ID | Drug resistance | Lineage | Country iso2 | ERR294248 | HR-TB | None | ERR323036 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323063 | HR-TB | None | ERR323041 | HR-TB | None | ERR323045 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3283010 | Other | La1 | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR3283028 | Other | None | ERR3283017 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR3797082 | Other | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188350 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR736875 | HR-TB | lineage4 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR8976043 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9119096 | Other | lineage4.3.3 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR10851637 | Sensitive | lineage4.3.3 | None | SRR1162740 | Other | lineage4.1.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None | SRR13861646 | Other | lineage4.9 | None | SRR16370251 | Sensitive | None | SRR1640750 | HR-TB | None | SRR19451491 | Sensitive | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | ERR1035239 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675486 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675222 | Other | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675571 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675555 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR5341373 | HR-TB | lineage4 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR2514389 | Other | lineage3 | None | ERR4820268 | Sensitive | lineage4.9 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | ERR1035138 | MDR-TB | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5535933 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2693239 | HR-TB | None | ERR4821053 | Other | lineage3 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045952 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046514 | HR-TB | None | ERR4830353 | Other | None | SRR6325444 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None |
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