EBG00000313325 - n.184C>T
Drug resistance types
12 Sensitive
6 RR-TB
31 HR-TB
16 MDR-TB
6 Pre-XDR-TB
2 XDR-TB
114 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 8 |
| lineage4.9 | 48 |
| 13 | |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| La3;lineage4.9 | 5 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 7 |
| lineage2.1;lineage4.9;lineage6.3 | 7 |
| lineage2.1 | 4 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.1;lineage4.9 | 9 |
| lineage2.2 | 3 |
| lineage3 | 5 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.8 | 3 |
| M.canetti;lineage4.9 | 1 |
| lineage4 | 2 |
| lineage4.1.1.3 | 4 |
| lineage4.6.2.2 | 3 |
| lineage4.1.1.1 | 2 |
| lineage5.2 | 2 |
| La3 | 2 |
| La1.8.1 | 3 |
| lineage4.1.2.1 | 8 |
| lineage4.1;lineage4.8 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.3.3 | 1 |
| lineage2.2.1.2 | 2 |
| lineage6.3.1 | 1 |
| lineage1.1.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.2.2 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage4.4.2 | 1 |
| La1.3 | 1 |
| La3;lineage4.8 | 1 |
| lineage6.1.3 | 2 |
| lineage3.1 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage2.1;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La3;lineage2.2.2 | 1 |
| lineage4.1.3 | 2 |
| lineage1.2.2.2 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 187 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180137 | Other | lineage2.2.1 | None | SRR1173778 | Other | lineage4.9 | None | SRR1196768 | MDR-TB | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1710057 | Other | lineage2.1 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR12328189 | Sensitive | lineage2.2.1 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046046 | Other | lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | ERR4799025 | Other | lineage4.8 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR1172728 | RR-TB | La3 | None | ERR3283010 | Sensitive | La1.8.1 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR7496509 | Other | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675311 | Other | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR212001 | HR-TB | None | SRR1172857 | Other | None | ERR9787197 | Other | None | SRR28119752 | Other | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1196566 | Other | lineage4.9 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR7240476 | Other | La1.8.1 | None | ERR13267017 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR1063855 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | DRR188519 | Other | lineage4.4.2 | None | SRR7535086 | Other | None | ERR4769436 | Other | La1.3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR28119777 | Other | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR12015083 | Other | La3;lineage4.8 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR7496472 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR28046032 | Sensitive | lineage3 | None | ERR9786843 | Other | None | SRR1184381 | MDR-TB | None | ERR11465024 | Other | lineage4.1.1.3 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR9786604 | Other | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR4815752 | Other | lineage4.9 | None | ERR9787165 | Other | lineage6.1.3 | None | ERR4816322 | Other | lineage4.9 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR29016780 | Other | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR5535933 | Other | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3416776 | Other | lineage2.1 | None | SRR6045053 | Other | lineage4 | None | SRR7496517 | Other | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR13245558 | MDR-TB | La3;lineage2.2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR6789626 | Other | None | ERR4816852 | Other | lineage4.9 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | SRR1196546 | Other | lineage4.9 | None | SRR1165699 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR11465025 | Other | lineage4.1.1.3 | None | ERR11081258 | Other | lineage4.8 | None | ERR11049020 | Other | lineage4.8 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4800341 | Other | lineage3 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675549 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1172817 | Other | La3 | None | SRR1173400 | Other | lineage4.9 | None | SRR29017461 | Other | La3;lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR212033 | Other | lineage4.9 | None | SRR28119805 | Other | lineage4.9 | None | ERR234659 | Other | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR1791725 | Other | La1.8.1 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR7585440 | Sensitive | lineage2.2.1 | in | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR29050928 | Other | lineage4.9 | None |
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