ERR4815550
|
Other
|
lineage2.2;lineage4.9
|
None
|
SRR21658550
|
Other
|
lineage1.1.1
|
None
|
ERR11466146
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR5341293
|
Sensitive
|
lineage4.9
|
None
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
SRR6046492
|
Other
|
lineage4.9
|
None
|
ERR2446509
|
Other
|
lineage3
|
nl
|
ERR926160
|
Sensitive
|
lineage4.9
|
None
|
SRR25827497
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR5818647
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR4769521
|
RR-TB
|
lineage4.9
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
SRR5341330
|
Other
|
lineage4.9
|
None
|
SRR1173706
|
Other
|
lineage4.9
|
None
|
ERR2600612
|
Sensitive
|
lineage4.8
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
ERR5311078
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR7240033
|
Other
|
La1.2;La1.8.1
|
None
|
ERR4817628
|
Sensitive
|
lineage4.8
|
gb
|
SRR6045219
|
HR-TB
|
lineage4.9
|
None
|
SRR3675245
|
Other
|
lineage4.1.2.1
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
ERR926158
|
Sensitive
|
lineage4.9
|
None
|
SRR22424787
|
Sensitive
|
lineage4.9
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
ERR161039
|
HR-TB
|
La3;lineage4.3.4
|
None
|
SRR7496471
|
Sensitive
|
lineage4
|
None
|
ERR3797036
|
HR-TB
|
lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR1063846
|
HR-TB
|
lineage4.9
|
None
|
SRR6325447
|
MDR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR2041726
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4814639
|
HR-TB
|
lineage4.9
|
None
|
ERR1023295
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.2.1
|
None
|
SRR3675515
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR323053
|
MDR-TB
|
La2;lineage4.9;lineage9
|
None
|
ERR926159
|
Sensitive
|
lineage4.9
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR11049020
|
Other
|
lineage4.8
|
None
|
SRR1172885
|
HR-TB
|
lineage4.9
|
None
|
SRR6045948
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4596910
|
Sensitive
|
lineage4.9
|
None
|
SRR6325444
|
MDR-TB
|
M.canetti;lineage2.1;lineage6.3
|
None
|
ERR760733
|
MDR-TB
|
lineage4.1.2.1.1
|
None
|
SRR6046250
|
Other
|
lineage4.9
|
None
|
ERR702406
|
Other
|
lineage2.1
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
ERR1063849
|
HR-TB
|
lineage4.9
|
None
|
SRR069989
|
HR-TB
|
lineage2.2.2
|
None
|
ERR3797047
|
MDR-TB
|
lineage4.9
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR1173400
|
Other
|
lineage4.9
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675450
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR1172234
|
Other
|
lineage4.9
|
None
|
ERR323055
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1172796
|
Sensitive
|
lineage2.2.1.2
|
None
|
SRR1196571
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR176751
|
Other
|
lineage4.9
|
None
|
SRR26937071
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
ERR4799513
|
HR-TB
|
lineage2.2
|
None
|
SRR1915485
|
Other
|
La1.2.BCG
|
None
|
SRR1184346
|
HR-TB
|
lineage3.1
|
None
|
SRR6045785
|
MDR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR8976043
|
HR-TB
|
lineage2.1;lineage2.2;lineage6.3
|
None
|
SRR5341422
|
HR-TB
|
La1.7;lineage4.9;lineage7
|
None
|
ERR5908228
|
RR-TB
|
lineage4.3.3
|
None
|
SRR1180147
|
Other
|
lineage2.2.1.1
|
None
|
SRR1181390
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR5311090
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2041725
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1915487
|
Other
|
La1.2.BCG
|
None
|
ERR323041
|
HR-TB
|
M.canetti;lineage2.1
|
None
|
ERR323038
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
ERR4814536
|
MDR-TB
|
M.canetti;lineage2.1;lineage3
|
None
|
ERR4769514
|
Other
|
La1.3
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
SRR5341456
|
Other
|
lineage4.9
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR1181368
|
Other
|
lineage4.9
|
None
|
SRR20632814
|
Sensitive
|
lineage4.9
|
None
|
SRR25827682
|
Other
|
|
None
|
ERR234659
|
Other
|
|
None
|
ERR6359045
|
Other
|
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
|
None
|
ERR473314
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR30182894
|
Other
|
lineage1.2.2.1
|
None
|
SRR29093105
|
Other
|
lineage2.2.2;lineage4
|
None
|
ERR126600
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR181824
|
HR-TB
|
lineage4.9
|
None
|
ERR502908
|
HR-TB
|
lineage2.2.1
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR176778
|
HR-TB
|
lineage4.9
|
None
|
ERR926156
|
Sensitive
|
lineage4.9
|
None
|
SRR3675539
|
HR-TB
|
lineage4.9;lineage7
|
None
|
ERR2513229
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1181289
|
Other
|
lineage2.2.1
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
SRR7240492
|
HR-TB
|
La1.7.1
|
None
|
SRR1173633
|
Other
|
lineage4.9
|
None
|
SRR1173453
|
Other
|
lineage4.4.1.1
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
SRR3675555
|
HR-TB
|
lineage2.1;lineage4.9;lineage7
|
None
|
SRR6046382
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1640750
|
Other
|
|
None
|
SRR3675568
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
SRR5341333
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4831545
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR867544
|
Other
|
lineage4.9
|
None
|
ERR867570
|
RR-TB
|
lineage4.9
|
None
|
ERR3275196
|
Other
|
lineage2.2.1
|
nl
|
ERR323060
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1175513
|
Sensitive
|
lineage4.9
|
None
|
ERR1063858
|
HR-TB
|
lineage4.9
|
None
|
ERR3275190
|
Other
|
lineage3
|
nl
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
ERR4828872
|
Sensitive
|
lineage4.2;lineage4.9
|
None
|
SRR1049674
|
HR-TB
|
lineage2.2.1
|
None
|
ERR926157
|
Sensitive
|
lineage4.9
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
ERR4816762
|
Sensitive
|
lineage4.9
|
None
|
ERR10796560
|
Other
|
lineage4.9
|
None
|
ERR181744
|
HR-TB
|
La3;lineage4.9
|
None
|
SRR3675322
|
HR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR4818929
|
HR-TB
|
lineage4.9
|
None
|
ERR4188342
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR11252599
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
SRR5341373
|
Other
|
lineage4.9
|
None
|
SRR1172310
|
HR-TB
|
lineage4.9
|
None
|
SRR1173562
|
Sensitive
|
lineage4.9
|
None
|
SRR3675270
|
Other
|
lineage4.9
|
None
|
SRR3675507
|
Other
|
lineage4.9
|
None
|
SRR1181403
|
Other
|
lineage4.9
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR4817893
|
Other
|
La3;lineage4.8
|
None
|
ERR4815783
|
Other
|
lineage4.1.2.1
|
gb
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR736817
|
HR-TB
|
lineage4.3.4
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1172807
|
Sensitive
|
lineage4.9
|
None
|
ERR161034
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1180440
|
Other
|
lineage4.9
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
ERR4814994
|
HR-TB
|
lineage2.2.1
|
gb
|
SRR1175074
|
Other
|
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR108125
|
RR-TB
|
lineage4.9
|
None
|
ERR1063857
|
MDR-TB
|
La2;lineage4.9
|
None
|
ERR1035138
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR323045
|
HR-TB
|
lineage1;lineage4.9
|
None
|
SRR5067637
|
Other
|
lineage2.2.1
|
vn
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
ERR1873396
|
Pre-XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR3675486
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR736839
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
ERR1035157
|
Other
|
lineage4.9
|
None
|
ERR181887
|
Other
|
lineage4.9
|
None
|
ERR2229198
|
Sensitive
|
lineage4.8
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
ERR4769433
|
RR-TB
|
lineage4.9
|
None
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
ERR323064
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR9119525
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR161033
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
SRR5341470
|
MDR-TB
|
lineage4.9;lineage9
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
SRR3675582
|
Other
|
lineage4.9
|
None
|
SRR15014655
|
Other
|
M.canetti;lineage1
|
None
|
ERR926161
|
Sensitive
|
lineage4.9
|
None
|
SRR6046720
|
HR-TB
|
lineage4.9;lineage9
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6458421
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1063862
|
HR-TB
|
lineage4.9
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
ERR7821123
|
Other
|
lineage1.1.3.2
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR212121
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
ERR926163
|
Other
|
lineage4.9
|
None
|
ERR278594
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR176779
|
HR-TB
|
lineage4.9
|
None
|
ERR3283021
|
HR-TB
|
lineage4.9
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
SRR1180977
|
Sensitive
|
lineage4.9
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
ERR4769552
|
Sensitive
|
La1.3
|
None
|
ERR4817731
|
HR-TB
|
lineage4.9
|
None
|
SRR3675518
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR176643
|
Other
|
La3;lineage4.9
|
None
|
SRR1175049
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR9117709
|
Other
|
|
None
|
ERR4818831
|
Other
|
lineage3
|
None
|
SRR6832644
|
Other
|
lineage4.3.3;lineage4.9
|
None
|
SRR6832644
|
Other
|
lineage4.3.3;lineage4.9
|
None
|
ERR3445501
|
HR-TB
|
La1.7.1;La1.7.X-unk4;lineage7
|
None
|
ERR13265748
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR3797086
|
Sensitive
|
lineage4.9
|
None
|
ERR1023236
|
Other
|
lineage6.1.3
|
None
|
SRR12708389
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR2514215
|
Other
|
lineage2.2.1
|
gb
|
ERR2229542
|
Other
|
lineage4.8
|
None
|
SAMN02414850
|
Other
|
lineage4.1.2.1
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
SRR16278274
|
Other
|
La1.4
|
None
|
ERR212125
|
HR-TB
|
lineage4.9
|
None
|
SRR1510066
|
RR-TB
|
lineage1.2.1.2.1
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6046225
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR3675320
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9
|
None
|
ERR323033
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3077978
|
RR-TB
|
lineage1.1
|
None
|
ERR1873393
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR323054
|
MDR-TB
|
La3;M.canetti;lineage3.1
|
None
|
ERR386953
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1165584
|
Other
|
lineage4.1.2.1
|
None
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
ERR9786843
|
Other
|
|
None
|
SRR6325448
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR3675554
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR27069387
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR987722
|
MDR-TB
|
|
None
|
ERR212001
|
HR-TB
|
|
None
|
ERR212033
|
Other
|
lineage4.9
|
None
|
SRR28119752
|
Other
|
lineage4.9
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
SRR10808730
|
Other
|
lineage4.9
|
None
|
ERR4819175
|
Other
|
lineage4.1.1.3
|
gb
|
ERR11465024
|
Other
|
lineage4.1.1.3
|
None
|
ERR124652
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1162864
|
Other
|
lineage4.1.2.1
|
None
|
SRR6044815
|
Other
|
lineage4.9
|
None
|
SRR6046295
|
HR-TB
|
lineage4.2;lineage4.9
|
None
|
ERR3283055
|
HR-TB
|
lineage4.9
|
None
|
ERR4819462
|
Sensitive
|
lineage4.9
|
None
|
ERR4821718
|
Sensitive
|
lineage4.2.2.2
|
gb
|
ERR7911670
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
SRR1180226
|
HR-TB
|
lineage4.9
|
None
|
SRR1181256
|
Other
|
lineage4.9
|
None
|
SRR7069391
|
Other
|
lineage4.9
|
None
|
ERR3445502
|
Sensitive
|
lineage4.9;lineage7
|
None
|
ERR4819422
|
HR-TB
|
lineage4.9
|
None
|
ERR736865
|
HR-TB
|
lineage4.3.2;lineage4.9
|
None
|
ERR736835
|
HR-TB
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR1140724
|
Other
|
lineage2.2.1
|
None
|
SRR18003031
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6046397
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR926165
|
Sensitive
|
lineage4.9
|
None
|
SRR1173363
|
Other
|
|
None
|
SRR1181214
|
Other
|
lineage4.9
|
None
|
SRR6046385
|
Sensitive
|
lineage4.9
|
None
|
SRR6046878
|
Other
|
lineage4.9
|
None
|
SRR6045217
|
Sensitive
|
lineage4.9
|
None
|
ERR4815310
|
Other
|
lineage2.2.1;lineage4.9
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR6358837
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR3797016
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR038268
|
HR-TB
|
La3;M.canetti;lineage4.8;lineage4.9
|
None
|
ERR3077969
|
Other
|
La1.3
|
None
|
ERR3445504
|
Other
|
lineage4.9;lineage6.1.3
|
None
|
ERR3797023
|
HR-TB
|
La1.8.1
|
None
|
ERR4819314
|
Other
|
lineage1.1.1
|
None
|
ERR4819241
|
Other
|
lineage4.9
|
None
|
SRR1172951
|
Other
|
lineage4.9
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
SRR1196768
|
MDR-TB
|
|
None
|
ERR176651
|
Other
|
lineage4.9
|
None
|
ERR176658
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR752229
|
Other
|
lineage4.5
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
SRR3675508
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3468607
|
Other
|
lineage4.9
|
None
|
SRR1049675
|
HR-TB
|
lineage2.2.1
|
None
|
SRR29016780
|
Other
|
lineage4.9
|
None
|
ERR4820798
|
Other
|
lineage3.1.2.1
|
gb
|
SRR1175052
|
HR-TB
|
lineage4.9
|
None
|
ERR1035239
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR323063
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR323058
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR387051
|
Other
|
lineage4.9
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
SRR12142339
|
HR-TB
|
lineage2.2.1
|
None
|
SRR29772570
|
Other
|
lineage4.9
|
None
|
SRR26399995
|
Other
|
lineage2.2.1
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
ERR294248
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
SRR5341313
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
SRR1183049
|
RR-TB
|
lineage2.2
|
None
|
SRR1062919
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR11349211
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR323034
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage3.1
|
None
|
ERR772255
|
MDR-TB
|
lineage2.1;lineage4.3.2
|
None
|
ERR4821519
|
Other
|
lineage3
|
gb
|
ERR8665994
|
Other
|
lineage4.9
|
None
|
ERR10796628
|
Other
|
lineage4.3.3
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR1792478
|
HR-TB
|
La1.7.1
|
None
|
SRR5341432
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR5311101
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR7240476
|
Other
|
La1.8.1
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
ERR323036
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR124642
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR3797028
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR1163221
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR6045548
|
Sensitive
|
lineage4.9
|
None
|
SRR11342642
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR067712
|
Sensitive
|
lineage4.9
|
None
|
ERR4817434
|
Other
|
lineage3
|
None
|
SRR1184312
|
Other
|
lineage2.2.1
|
None
|
ERR4821962
|
Other
|
lineage4.1.1.3
|
gb
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6045526
|
Other
|
lineage4.9
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
SRR1174897
|
MDR-TB
|
lineage4.9;lineage9
|
None
|
SRR1173384
|
Other
|
lineage4.9
|
None
|
SRR6046133
|
HR-TB
|
lineage4.9
|
None
|
SRR1169306
|
Other
|
La3;lineage4.9
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
ERR4829360
|
Sensitive
|
lineage4.7
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
ERR4799478
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6789626
|
Other
|
|
None
|
ERR4769495
|
Other
|
La1.3
|
None
|
ERR4769457
|
Other
|
lineage4.9
|
None
|
ERR4816470
|
HR-TB
|
lineage3
|
None
|
ERR4798648
|
MDR-TB
|
lineage3.1.2.2
|
None
|
ERR4821769
|
Other
|
lineage4.1.2.1
|
None
|
ERR216938
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR3283016
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4872119
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR3675248
|
Other
|
lineage4.9
|
None
|
SRR1196474
|
Other
|
lineage3.1.1
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
ERR4815441
|
HR-TB
|
lineage4.9
|
None
|
ERR4816571
|
Sensitive
|
lineage1.1.2
|
None
|
ERR2229143
|
RR-TB
|
lineage4.9
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
SRR7535086
|
Other
|
|
None
|
SRR1165699
|
Other
|
lineage4.9
|
None
|
ERR4819877
|
HR-TB
|
lineage4.9
|
None
|
ERR126618
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4814905
|
Sensitive
|
lineage4.8
|
gb
|
ERR4800341
|
Other
|
lineage3
|
None
|
ERR4816478
|
HR-TB
|
lineage4
|
None
|
ERR926154
|
Sensitive
|
lineage4.9
|
None
|
SRR1172728
|
RR-TB
|
La3
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
ERR4769493
|
Other
|
lineage4.9
|
None
|
SRR1173767
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1181091
|
Other
|
lineage2.2.1.1
|
None
|
ERR4821616
|
Other
|
lineage1.1.3.1
|
None
|
ERR926164
|
Other
|
lineage4.9
|
None
|
ERR4816656
|
Other
|
lineage4.9
|
None
|
ERR176766
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
SRR14782405
|
HR-TB
|
lineage4.9
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
SRR1180172
|
Other
|
lineage2.2.1
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
ERR4831117
|
HR-TB
|
lineage4.9;lineage7
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
SRR5341302
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR3797065
|
RR-TB
|
lineage4.9
|
None
|
SRR1165423
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1184024
|
RR-TB
|
lineage2.2.1.1
|
None
|
SRR11972367
|
Sensitive
|
lineage2.2.1
|
None
|
ERR502470
|
RR-TB
|
lineage4.9
|
None
|
SRR1183111
|
HR-TB
|
lineage4.9
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR6358991
|
HR-TB
|
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
|
None
|
SRR5341315
|
Other
|
La1.7;lineage3;lineage4.9;lineage7
|
None
|
SRR3675311
|
Other
|
lineage4.9
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
SRR1183144
|
Other
|
lineage2.2.1
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
SRR1183106
|
RR-TB
|
lineage2.2.1.1
|
None
|
ERR6359082
|
Other
|
lineage4.9
|
None
|
SRR6046485
|
Other
|
lineage4.9
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
SRR2100532
|
Sensitive
|
lineage3
|
None
|
ERR4769555
|
Sensitive
|
La1.3
|
None
|
ERR867545
|
Other
|
lineage4.9
|
None
|
ERR9119096
|
RR-TB
|
lineage4.3.3
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
SRR6046442
|
Other
|
lineage3
|
None
|
ERR3283025
|
MDR-TB
|
La1.7;lineage4.9
|
None
|
SRR1172857
|
Other
|
|
None
|
SRR6325442
|
HR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
ERR10796635
|
Other
|
lineage4.8
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR228175
|
Sensitive
|
lineage3
|
None
|
ERR323047
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR736875
|
HR-TB
|
lineage4.9
|
None
|
SRR6045555
|
Other
|
lineage4.9
|
None
|
SRR7496523
|
Other
|
lineage4.7
|
None
|
SRR16156804
|
Sensitive
|
lineage4.9
|
None
|
SRR1165667
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR1167384
|
Other
|
La3;lineage4.9
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9
|
None
|
ERR502524
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
SRR1196566
|
Other
|
lineage4.9
|
None
|
SRR23961558
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR926155
|
Sensitive
|
lineage4.9
|
None
|
SRR6045952
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1180137
|
Other
|
lineage2.2.1
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR18549032
|
HR-TB
|
lineage2.2.1.2;lineage7
|
None
|
ERR1199132
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1196583
|
Other
|
lineage4.9
|
None
|
SRR6046540
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1165506
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675571
|
HR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR7069473
|
Other
|
lineage4.1.1.2
|
None
|
SRR7069922
|
Other
|
lineage2.2.1
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
SRR1175127
|
Other
|
lineage2.2.1.2
|
None
|
ERR987729
|
HR-TB
|
lineage3.1.2.1;lineage3.1.2.2
|
None
|
SRR7069931
|
Other
|
lineage4.2.2.2
|
None
|
SRR1181215
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
ERR176568
|
HR-TB
|
La3;lineage2.1;lineage4.9
|
None
|
SRR1173788
|
Sensitive
|
lineage4.9
|
None
|
ERR2693239
|
RR-TB
|
M.canetti;lineage2.1;lineage4
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675506
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1180946
|
Sensitive
|
lineage2;lineage4.9
|
None
|
ERR4822138
|
Other
|
lineage4.1.2.1
|
None
|
ERR245758
|
Other
|
lineage4.9.1
|
None
|
SRR26399973
|
Other
|
La3;lineage4.9
|
None
|
SRR6045191
|
Sensitive
|
lineage4.9
|
None
|
ERR3797083
|
RR-TB
|
lineage4.9
|
None
|
SRR5341400
|
Sensitive
|
lineage4.9
|
None
|
SRR5818394
|
Other
|
lineage4.9
|
None
|
ERR473277
|
HR-TB
|
La3;M.canetti;lineage4.9
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
SRR6046299
|
Other
|
lineage4.3.1;lineage4.9;lineage6
|
None
|
SRR6046577
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
ERR323039
|
HR-TB
|
La2;lineage4.9
|
None
|
SRR1196677
|
Other
|
lineage2.2
|
None
|
SRR11342687
|
RR-TB
|
lineage4.2.2.2
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
SRR1167055
|
Other
|
lineage4.1.2.1
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR736848
|
Other
|
lineage4.9
|
None
|
SRR1184114
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR5917972
|
MDR-TB
|
lineage4.4.1.1
|
za
|
SRR14801759
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR1173218
|
Other
|
lineage4.3.3
|
None
|
SRR6325445
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR4819206
|
Other
|
lineage4.8
|
None
|
ERR323040
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR1063839
|
MDR-TB
|
La2;lineage2.2
|
None
|
SRR1184298
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR18003019
|
Other
|
lineage2.2.1
|
None
|
SRR1172717
|
Sensitive
|
lineage4.9
|
None
|
ERR9119669
|
HR-TB
|
lineage4.9
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
SRR1173355
|
Other
|
lineage4.9
|
None
|
ERR4815022
|
Other
|
lineage3.1.2.1
|
None
|
ERR124651
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR4188247
|
HR-TB
|
lineage4.9
|
None
|
ERR4821053
|
RR-TB
|
lineage3
|
None
|
SRR1169194
|
Other
|
lineage4.9
|
None
|
SRR7496517
|
Other
|
|
None
|
ERR4820773
|
HR-TB
|
lineage4.9
|
None
|
ERR323108
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR13267017
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR3675231
|
MDR-TB
|
lineage4.9;lineage7
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR987765
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1162740
|
Other
|
lineage4.1.2.1
|
None
|
ERR126608
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR926162
|
Sensitive
|
lineage4.9
|
None
|
SRR1181020
|
Other
|
lineage2.2.1
|
None
|
ERR867569
|
Other
|
lineage4.9
|
None
|
SRR1165628
|
Other
|
La3;lineage4.9
|
None
|
SRR1184021
|
Sensitive
|
lineage4.9
|
None
|