EBG00000313325 - n.78T>C
Drug resistance types
67 Sensitive
37 RR-TB
89 HR-TB
105 MDR-TB
8 Pre-XDR-TB
3 XDR-TB
194 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2.1 | 4 |
| La1.8.1 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9 | 12 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.9 | 162 |
| La3;lineage4.9 | 6 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 15 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4 | 5 |
| La1.2;La1.8.1 | 1 |
| lineage4.1.3 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1 | 29 |
| lineage4.6.2.2 | 2 |
| lineage2.1;lineage4.9 | 13 |
| lineage4.1.2.1 | 16 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| lineage3 | 12 |
| lineage1;lineage4.9 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage4.9;lineage9 | 3 |
| lineage4.6.1.1 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 8 |
| lineage4.4.1.1 | 3 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage2.2 | 6 |
| lineage4.9;lineage7 | 4 |
| La1.7;lineage4.9 | 4 |
| lineage2;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| La2;lineage4.9 | 2 |
| lineage4.3.3 | 7 |
| La1.3 | 5 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.1.2.1.1 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage2.2.1.1 | 4 |
| lineage4.8;lineage4.9 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage1.1.1 | 2 |
| lineage2.2.1.2 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 8 |
| lineage4.8.1 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage2.1 | 3 |
| M.canetti;lineage2.1 | 1 |
| La3 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage4.1.1.3 | 3 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| M.canetti;lineage2.2 | 3 |
| lineage4.7 | 2 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| 16 | |
| lineage4.8 | 11 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| lineage3.1 | 1 |
| lineage3.1.2.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage3.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1.1.1 | 2 |
| lineage2.2.1.2;lineage7 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage1.1.3.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.3.3;lineage4.9 | 2 |
| lineage2.1;lineage4.3.2 | 1 |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage4.9 | 3 |
| lineage6.1.3 | 1 |
| La1.2.BCG | 3 |
| La1.4 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| lineage1.1 | 1 |
| La1.7.1 | 2 |
| La3;M.canetti;lineage3.1 | 1 |
| M.canetti;lineage2.1;lineage3 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage3.1.2.1 | 2 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.3.4 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| La2;lineage2.2 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| lineage4.9.1 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage4.2.2.2 | 3 |
| lineage1.1.2 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.5 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.8 | 1 |
| lineage4.4.1.1.1 | 1 |
| M.canetti;lineage2.1;lineage4 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 503 |
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR7240476 | Other | La1.8.1 | None | ERR3283016 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR176658 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR1181349 | Sensitive | lineage4 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR26159043 | Other | lineage4.9 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR3675486 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4769457 | Other | lineage4.9 | None | SRR1173400 | Other | lineage4.9 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | ERR4816470 | HR-TB | lineage3 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR1173384 | Other | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR323058 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1873393 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | SRR1173562 | Sensitive | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR7821123 | Other | lineage1.1.3.2 | None | ERR2446566 | Other | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR926163 | Other | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR867544 | Other | lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1165699 | Other | lineage4.9 | None | ERR176751 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | ERR4769552 | Sensitive | La1.3 | None | ERR10796560 | Other | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | SRR1181289 | RR-TB | lineage2.2.1 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1175049 | Other | lineage4.8;lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6044815 | RR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR1172234 | Other | lineage4.9 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR1162864 | MDR-TB | lineage4.1.2.1 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR323041 | MDR-TB | M.canetti;lineage2.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR4769452 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR3468607 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1172817 | Other | La3 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR1510066 | RR-TB | lineage1.2.1.2.1 | None | ERR126608 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR3675515 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR473314 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR926155 | Other | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR7496523 | Other | lineage4.7 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR9119096 | RR-TB | lineage4.3.3 | None | SRR6046442 | Other | lineage3 | None | SRR3675554 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR1184381 | MDR-TB | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1173706 | Other | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR2600612 | Sensitive | lineage4.8 | None | SRR6045347 | Other | lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR6046593 | Other | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR386953 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR323036 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR1196474 | Other | lineage3.1.1 | None | SRR069989 | HR-TB | lineage2.2.2 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6325442 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR2229143 | RR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR6358837 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR126600 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR1196566 | Other | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR1172728 | RR-TB | La3 | None | ERR8665994 | RR-TB | lineage4.9 | None | SRR1173767 | MDR-TB | lineage4.4.1.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR11049020 | Other | lineage4.8 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR4819546 | HR-TB | lineage3 | None | ERR926164 | Other | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR4818831 | Other | lineage3 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR3675450 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4814905 | Sensitive | lineage4.8 | gb | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR1196546 | Other | lineage4.9 | None | ERR2229542 | Other | lineage4.8 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | SRR1165423 | RR-TB | lineage4.1.2.1 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR1023236 | Other | lineage6.1.3 | None | SRR1915485 | Other | La1.2.BCG | None | ERR4769555 | Sensitive | La1.3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675311 | Other | lineage4.9 | None | ERR5908228 | RR-TB | lineage4.3.3 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR6045952 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | ERR3275196 | RR-TB | lineage2.2.1 | nl | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR4819241 | Other | lineage4.9 | None | SRR7240492 | MDR-TB | La1.7.1 | None | SRR6046485 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | SRR1915487 | Other | La1.2.BCG | None | SRR2100532 | Sensitive | lineage3 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR1165584 | Other | lineage4.1.2.1 | None | ERR323038 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675568 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | SRR1173788 | Sensitive | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR1173363 | Other | None | ERR9786843 | Other | None | SRR1640750 | RR-TB | None | SRR1184372 | MDR-TB | None | ERR9117709 | Other | None | SRR7535086 | Other | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR987722 | MDR-TB | None | SRR25827682 | Other | None | ERR212001 | HR-TB | None | SRR1172857 | Other | None | SRR7496517 | Other | None | ERR323040 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR1180406 | Sensitive | lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR278594 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR176766 | MDR-TB | lineage2.1;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR4800341 | HR-TB | lineage3 | None | ERR176651 | Other | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | SRR7069473 | Other | lineage4.1.1.2 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR502908 | HR-TB | lineage2.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | ERR4769493 | Other | lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR26399995 | Other | lineage2.2.1 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR3675270 | Other | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR6045217 | Other | lineage4.9 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR6046878 | Other | lineage4.9 | None | ERR4821519 | Other | lineage3 | gb | SRR7069391 | Other | lineage4.9 | None | ERR245758 | Other | lineage4.9.1 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR124652 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR5535933 | Other | lineage4.9 | None | SRR1173355 | Other | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR1162740 | Other | lineage4.1.2.1 | None | ERR3797083 | RR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR4821053 | RR-TB | lineage3 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR1196677 | Other | lineage2.2 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR926156 | Other | lineage4.9 | None | ERR323063 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR1163221 | MDR-TB | lineage4.1.2.1 | None | SRR1173633 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR4816571 | Sensitive | lineage1.1.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6045555 | Other | lineage4.9 | None | SRR6045548 | Other | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR4817434 | Other | lineage3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR3797016 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR5067637 | Other | lineage2.2.1 | vn | SRR12142341 | HR-TB | lineage2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR867545 | Other | lineage4.9 | None | ERR323047 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR323060 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR1175074 | Other | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR6789626 | Other | None | SRR27069387 | MDR-TB | lineage2.2.1 | None | ERR234659 | HR-TB | None | SRR28119805 | Other | lineage4.9 | None | SRR1196768 | MDR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR4819206 | Other | lineage4.8 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR10796635 | Other | lineage4.8 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR20632814 | Sensitive | lineage4.9 | None | SRR3675507 | RR-TB | lineage4.9 | None | SRR7069931 | Other | lineage4.2.2.2 | None | SRR5341330 | Other | lineage4.9 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR4821718 | Sensitive | lineage4.2.2.2 | gb | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR5818394 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR3675322 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR1169194 | Other | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR3077969 | Other | La1.3 | None | SRR1173218 | Other | lineage4.3.3 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR228175 | Sensitive | lineage3 | None | ERR2446509 | Other | lineage3 | nl | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | SRR3675506 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR3797023 | MDR-TB | La1.8.1 | None | ERR4829360 | Sensitive | lineage4.7 | None |
|---|
