lineage | Count |
---|---|
lineage4 | 18 |
29 | |
lineage4.1.2 | 1 |
lineage4.1 | 2 |
lineage2.2.1 | 5 |
lineage4.3.4.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.3.2.1 | 1 |
lineage4.4.2 | 1 |
lineage4.1.2.1 | 1 |
lineage4.9 | 5 |
La1.2 | 1 |
lineage2.2 | 3 |
lineage4.5 | 1 |
lineage1.1.3.1 | 1 |
lineage2.2.1.2 | 2 |
lineage7;lineage2.2.1.2 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage4.1.1.2 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 77 |
ID | Drug resistance | Lineage | Country iso2 | SRR6046878 | HR-TB | lineage4 | None | SRR6046492 | Other | None | SRR6511621 | HR-TB | None | ERR4831117 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982147 | Sensitive | lineage2.2.1 | None | ERR11465151 | Sensitive | lineage4.3.4.1 | None | ERR1035122 | Sensitive | None | ERR323066 | Sensitive | lineage4 | None | ERR11465015 | Sensitive | lineage4.3.4.2.1 | None | ERR067699 | HR-TB | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | DRR188519 | Other | lineage4.4.2 | None | ERR323085 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR1063883 | Sensitive | lineage4 | None | ERR3445504 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR3283055 | HR-TB | None | ERR1213932 | Sensitive | lineage4.1.2.1 | None | ERR137286 | Sensitive | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR3797046 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR6358979 | Other | None | ERR4811493 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | ERR752229 | Other | lineage4.5 | None | SRR10808399 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR14801749 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR14782405 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR5341453 | Sensitive | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675270 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341330 | HR-TB | None | SRR5341456 | Other | None | ERR6359082 | Other | lineage4.9 | None | SRR5535933 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None |
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