Rv3596c - c.546G>C
Drug resistance types
142 Sensitive
6 RR-TB
59 HR-TB
7 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
62 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1 | 3 |
| lineage4.1.2.1 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.1.2 | 1 |
| lineage5.1.4 | 1 |
| 69 | |
| lineage4 | 96 |
| lineage4.9 | 70 |
| lineage3 | 1 |
| lineage2.2.1 | 11 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.4.2 | 1 |
| La1.2 | 1 |
| lineage4.5 | 2 |
| lineage2.2 | 4 |
| lineage4.3.4.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| La1.8.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 282 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2446566 | Other | lineage4.1 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341418 | Other | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341300 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | ERR1023509 | Other | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341315 | Sensitive | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341456 | Other | None | SRR5341469 | Other | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5535933 | HR-TB | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045503 | HR-TB | None | SRR6045519 | HR-TB | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046362 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045155 | Sensitive | lineage4.3.3 | None | SRR6046245 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046299 | HR-TB | None | ERR4830353 | Other | None | SRR6046492 | Other | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046824 | HR-TB | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6046897 | Sensitive | lineage4 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR4831638 | Sensitive | None | SRR6511621 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502943 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | ERR502889 | Other | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | DRR188519 | Other | lineage4.4.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR067681 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR1035122 | Sensitive | None | ERR1034652 | Other | None | ERR108471 | HR-TB | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR133825 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR3283014 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283028 | Other | None | ERR3283058 | Other | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3439432 | Other | None | ERR3283055 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797043 | HR-TB | None | ERR3797046 | HR-TB | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797063 | HR-TB | None | ERR4024991 | Other | None | ERR3797087 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR400326 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797264 | Sensitive | None | ERR4797313 | HR-TB | None | ERR4811030 | Sensitive | None | ERR4798431 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4798099 | Other | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4812155 | Sensitive | None | ERR4811493 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR6866022 | Other | None | ERR6865502 | Sensitive | lineage4 | None | ERR6358979 | Other | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866639 | Other | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR752229 | Other | lineage4.5 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1172717 | Other | lineage4.9 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1791747 | Other | La1.8.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR8692790 | RR-TB | lineage4 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR8692887 | Other | None | SRR8692882 | HR-TB | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR8692899 | Other | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR26399255 | Sensitive | lineage2.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675488 | HR-TB | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675477 | Other | lineage4.9 | None | ERR158583 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | None | SRR3675265 | Other | lineage4 | None | SRR3675222 | Other | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | SRR3675318 | Other | lineage4.9 | None | SRR3675502 | Other | None | SRR3675501 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | ERR216965 | HR-TB | lineage4.9 | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR212123 | Other | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675550 | Other | None |
|---|
