Rv0667 - c.393C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
31 Sensitive
5 RR-TB
32 HR-TB
8 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 58 |
| lineage4.8.1 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.3.3 | 1 |
| lineage2.2.1.2 | 3 |
| lineage4.9;lineage7 | 4 |
| lineage2.2 | 1 |
| La3;lineage4.9 | 7 |
| lineage4.1.2.1 | 2 |
| La1.7;lineage4.9 | 2 |
| La1;lineage4.9 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| La3;lineage4 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage2.1;lineage4.9 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage3 | 2 |
| 1 | |
| lineage4 | 2 |
| lineage2.2.1 | 10 |
| lineage4.4.1.1.1 | 1 |
| lineage2;lineage4 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.2.2 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.8 | 2 |
| lineage1.1.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.9;lineage9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 123 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21677886 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR176751 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR3283028 | Other | La3;lineage4 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046046 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR14782054 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4816470 | HR-TB | lineage3 | None | ERR6358991 | HR-TB | None | SRR7496471 | Sensitive | lineage4 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR323037 | Other | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR3675270 | Other | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR6045053 | Other | lineage4 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR5341330 | Other | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR2513259 | Other | lineage3 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | SRR6046593 | Other | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR6046382 | Sensitive | lineage2.2.1 | None |
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