Rv0668 - c.2139C>G


Drug resistance types
15 Sensitive 19 RR-TB 91 HR-TB 52 MDR-TB 5 Pre-XDR-TB 2 XDR-TB 95 Other
lineage Counts
lineage Count
La1.8.1 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage2.2.1 11
La1.7;lineage4.9 8
lineage2.1;lineage4.9 5
lineage4.9 57
lineage4.1.1.3 6
lineage3 6
M.canetti;lineage2.1;lineage4.9 24
lineage4.5 1
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.4.1.1 2
lineage2.2.2 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.1.2.1 11
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.2 4
lineage2.1;lineage2.2;lineage6.3 1
La1.7;lineage4.9;lineage7 3
lineage4.9;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9 12
lineage1.1 1
M.canetti;lineage2.1 1
5
lineage2.1;lineage4.1.1.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage4.1;lineage4.8 2
lineage1.2.1.2 1
La1.7.1 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage2.1;lineage4.9;lineage6.3 2
lineage4.8 4
M.canetti;lineage2.2.2;lineage6.2 2
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4 2
La3;M.canetti;lineage4.9 2
lineage4.6.3;lineage4.9 1
La3;lineage4.9 12
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4 1
La1.7 2
M.canetti;lineage2.2 3
lineage3.1.2.2 1
lineage4.3.4.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1.7.1;lineage4.9 1
lineage5.2 2
lineage1.2.1.2.1 1
lineage4.3.3 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage3 1
La1.7;M.canetti;lineage4.9 3
lineage3.1.2 1
M.canetti;lineage4.9 2
lineage4.3.2;lineage4.9 1
lineage3.1.2.1;lineage4 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage6.1.1 2
lineage2.2.1.2 2
lineage3.1.2.1;lineage3.1.2.2 1
La3;lineage2.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2 1
La2;lineage4.9 1
lineage4.9;lineage9 2
lineage1;lineage4.9 1
La1.7;lineage4.3.4.1 1
lineage4.6.2.2 2
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.4.2 1
La2;lineage4.9;lineage9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.1.2.1.1 1
La1.2 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.2 1
lineage2.2.1;lineage4.9 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.3.4.2.1 2
lineage4.3.4 1
M.canetti;lineage2.1;lineage4 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage1.1.2;lineage4 1
M.canetti;lineage4.3.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 279
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1791696 Other La1.8.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR11466044 Other lineage4.1.1.3 None
ERR990545 Other lineage3 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR069989 HR-TB lineage2.2.2 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675494 RR-TB lineage4.9 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR1183111 HR-TB lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR212001 HR-TB None
ERR212033 Other lineage4.9 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1180226 HR-TB lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR7240492 HR-TB La1.7.1 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR17832802 HR-TB lineage3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13861510 Other lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1165506 Other lineage4.1.2.1 None
SRR1172310 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8665994 Other lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
SRR6045053 Other lineage4 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR9896144 Other lineage3 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR1181020 Other lineage2.2.1 None
SRR1165628 Other La3;lineage4.9 None
ERR4830353 Other La1.7 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR181887 Other lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4798504 RR-TB lineage3 None
ERR11465801 Other lineage4.3.4.1 None
ERR3283011 Other La3;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4872094 MDR-TB lineage5.2 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675488 Other La1.7;lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
SRR13861332 Other lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR5908228 RR-TB lineage4.3.3 None
ERR7821163 Other lineage2.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR1165584 Other lineage4.1.2.1 None
ERR9119096 RR-TB lineage4.3.3 None
ERR9119500 MDR-TB lineage5.2 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR2514692 Other None
SRR7070027 Sensitive lineage3.1.2 None
ERR181824 HR-TB lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR2514821 Sensitive lineage2.2.1 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3275196 Other lineage2.2.1 nl
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR28351455 Other lineage3.1.2.1;lineage4 None
ERR1063858 HR-TB lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176651 Other lineage4.9 None
ERR12015084 Other lineage4.8 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3468607 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR29097026 Other lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9787014 Other lineage6.1.1 None
SRR1175127 Other lineage2.2.1.2 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR550637 MDR-TB lineage4.1.1.3 None
ERR4821053 RR-TB lineage3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR13861146 RR-TB lineage4.9 None
SRR3675269 RR-TB lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR18910194 HR-TB lineage2.2.2 None
SRR13861153 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR12015085 Other lineage4.8 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR29096150 Other lineage4.9 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR1181349 Sensitive lineage4 None
SRR1172885 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR3797064 Other La3;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR176751 Other lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR6198317 Other La1.2 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3799304 Other lineage6.1.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR23961559 Other La1.7;lineage4.2 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR20970016 Other lineage2.2 None
ERR9786843 Other None
ERR11252612 Other La3;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR987722 MDR-TB None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1162864 Other lineage4.1.2.1 None
SRR6044815 Other lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1181289 Other lineage2.2.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR13861322 Other lineage4.9 None
SRR3675243 Other lineage4.9 None
SRR1640750 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR1180137 Other lineage2.2.1 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675222 Other La1.7 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR2199988 MDR-TB lineage4.1.1.3 None
SRR13861224 Sensitive lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR1183049 RR-TB lineage2.2 None
SRR3675482 Other lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046046 Other lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR20969731 Other lineage2.2.1 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4799025 Other lineage4.8 None
SRR3675267 Other La1.7;lineage4.9 None
SRR6045526 Other lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4769450 Other lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR5917710 Other lineage4.1.2.1 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR2041726 MDR-TB lineage4.1.2.1 None