Rv3596c - c.357G>C
Drug resistance types
114 Sensitive
7 RR-TB
89 HR-TB
13 MDR-TB
5 Pre-XDR-TB
1 XDR-TB
47 Other
lineage Counts
| lineage | Count |
|---|---|
| 61 | |
| La1.8.1 | 2 |
| lineage4.9 | 62 |
| La1.7.1 | 1 |
| lineage2.2 | 5 |
| lineage2.2.1 | 14 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage2.1 | 1 |
| lineage4 | 95 |
| lineage4.5 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3 | 2 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.2.1.1 | 1 |
| La2 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.4.2 | 2 |
| lineage6.1.1 | 2 |
| lineage4;lineage3.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage4.7 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 276 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14782405 | HR-TB | None | SRR1791747 | Other | La1.8.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR8692871 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR176778 | HR-TB | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR176779 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815815 | Sensitive | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | ERR176651 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4814739 | MDR-TB | lineage2.2 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | ERR181887 | HR-TB | None | ERR176740 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | ERR4819462 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | ERR4819933 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341315 | Sensitive | None | SRR5341330 | HR-TB | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341469 | Other | lineage4 | None | SRR5341470 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR5535933 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046617 | HR-TB | lineage2.2.1 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046492 | Other | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046046 | Other | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6511621 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831117 | HR-TB | None | SRR6982388 | Sensitive | lineage4.1.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR7535082 | Sensitive | lineage4 | None | ERR502524 | HR-TB | La2 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR323053 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR323085 | Sensitive | lineage4 | None | ERR036207 | Other | lineage4.9 | None | ERR1034634 | HR-TB | None | ERR067712 | HR-TB | lineage4 | None | ERR1063857 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063896 | Sensitive | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR133825 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR349298 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4769450 | HR-TB | None | ERR4178226 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4024991 | Other | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4798431 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4798504 | Other | lineage3 | None | ERR6358951 | HR-TB | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR6866022 | Other | None | ERR6358979 | Other | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6359045 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR751326 | Sensitive | lineage4 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987722 | HR-TB | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR10808805 | Sensitive | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172310 | HR-TB | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173788 | Other | None | SRR1173568 | Other | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR13423546 | Other | lineage4.4.2 | None |
|---|
