Rv3596c - p.Ala150Thr
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
20 Sensitive
2 RR-TB
33 HR-TB
6 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 56 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| La2;lineage2.2 | 1 |
| lineage4 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage7 | 5 |
| lineage2.2.1 | 8 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.4.2 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1.2 | 3 |
| lineage3 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.5 | 2 |
| lineage4.3.4 | 1 |
| lineage4.8 | 1 |
| La2;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.3 | 1 |
| La1.7.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.8.1 | 1 |
| lineage2.2 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 106 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR387051 | Other | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR3675522 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | SRR6045371 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | ERR4812155 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR29017081 | Sensitive | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR5535933 | Other | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR29096425 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR161037 | Other | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR29096659 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR29096107 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR7240033 | Other | La1.8.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR5341456 | Other | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None |
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